New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 631429 = | 45 (0.750) | 4 (0.070) | 4/250 | NT | 8.7% | coding (264/1449 nt) | PP_0544 | ethanolamine transporter |
? | NC_002947 | 631522 = | 41 (0.720) | coding (171/1449 nt) | PP_0544 | ethanolamine transporter |
TACTGCTGGTCGGCCTGGGCGTGGCGTACGTCATTTCCGGCGATTACGCCGGCTGGAACTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/631580‑631429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaaGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAAGTCGACGGAGGAGCCTGCCGGCGA > NC_002947/631522‑631668 TACTGCTGGTCGGCCTGGGCGTGGCGTACGTCATTTCCGGCGATTACGCCGGCTGGAACTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCC < 2:306438/149‑1 CTGGTCGGCCTGGGCGTGGCGTACGTCATTTCCGGCGATTACGCCGGCTGGAACTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAA < 3:45973/147‑1 CTGGGCGTGGCGTACGTCATTTCCGGCGATTACGCCGGCTGGAACTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAA < 3:303633/138‑1 CTGGGCGTGGCGTACGTCATTTCCGGCGATTACGCCGGCTGGAACTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAA > 4:303633/1‑138 TGGAACTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGA > 5:167823/1‑149 CTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAG > 2:67011/1‑148 CCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACC < 6:167823/149‑1 TGCATGTGCTTCTCGCTGGCCGAAGTTCCAGCGGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTCCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAA < 1:67011/147‑1 GGCCGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAA > 7:252313/1‑130 GGCCGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAA < 8:252313/130‑1 GCCGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAAGTCGACGGAGGAGCCTGCCG > 4:172282/1‑149 CCGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAAGTCGACGGAGGAGCCTGCCGG < 2:295637/149‑1 CGAAGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAAGTCGACGGAGGAGCCTGCCGGC < 8:182708/149‑1 AAGTTCCAGCCGGCGAAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAAGTCGACGGAGGAGCCTGCCGGCGA < 3:313773/149‑1 TACTGCTGGTCGGCCTGGGCGTGGCGTACGTCATTTCCGGCGATTACGCCGGCTGGAACTTCGGCCTGGCGCAGGGTGGCTGGGGCGGCATGTTCCTGGCCACCTTGCTGATGGCAACCATGTACCTGTGCATGTGCTTCTCGCTGGCCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/631580‑631429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaaGTTCCAGCCGGCGTAATCGCCGGAAATGACGTACGCCACGCCCAGGCCGACCAGCAGTACCCAGCCGGCGGCGCCTTTTTTCAGTTCACGTTGCTGGAAATAGTCAGAGCCGACTTTCTCGAAGTCGACGGAGGAGCCTGCCGGCGA > NC_002947/631522‑631668 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |