New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 669450	102 (1.690)	5 (0.090)	5/248	NT	5.3%	coding (892/2355 nt)	pbpC	peptidoglycan glycosyltransferase
	?	NC_002947	= 669506	84 (1.490)					coding (948/2355 nt)	pbpC	peptidoglycan glycosyltransferase

AGCCGCTGGTGTTGGCGCCACGCCAGGAGCCGGCCCTGGCGCCATTGTTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/669298‑669450 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcacCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGATCAGCGGCGGACTGTCAGCGCTGTT  <  NC_002947/669506‑669360                                                                                                                                                                                                                                                                                                               AGCCGCTGGTGTTGGCGCCACGCCAGGAGCCGGCCCTGGCGCCATTGTTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCAGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGC                                                                                                                                                          >  1:124353/1‑149  GCCGCTGGTGTTGGCGCCACGCCAGGAGCCGGCCCTGGCGCCATTGTTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCG                                                                                                                                                         <  3:232718/149‑1   CCGCTGGTGTTGGCGCCACGCCAGGAGCCGGCCCTGGCGCCATTGTTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGC                                                                                                                                                        >  5:243208/1‑149     GCTGGTGTTGGCGCCACGCCAGGAGCCGGCCCTGGCGCCATTGTTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCAC                                                                                                                                                      >  4:244058/1‑149                                               GTTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GG                                                                                                            >  3:46930/1‑148                                                TTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTA                                                                                                          >  4:8204/1‑149                                                  GGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTAC                                                                                                         <  4:46930/148‑1                                                                  AGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCG                                                                                        <  6:243208/149‑1                                                                     GCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGC                                                                                     <  3:8204/149‑1                                                                                                                                                  GCGCGCACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGACGGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGATCAGCGGCGGACTGTCAG         >  1:84640/1‑149                                                                                                                                                    GCGCACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGATCAGCGGCGGACTGTCAGCGC      >  8:308634/1‑149                                                                                                                                                       CACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGATCAGCGGCGGACTGTCAGCGCTGT   <  6:140099/149‑1                                                                                                                                                        ACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGATCAGCGGCGGACTGTCAGCGCTGTT  >  5:357066/1‑149                                                                                                                                                        ACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGAT                          <  7:249565/125‑1                                                                                                                                                        ACCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGAT                          >  8:249565/1‑125                                                                                                                                                                                                                                                                                                               AGCCGCTGGTGTTGGCGCCACGCCAGGAGCCGGCCCTGGCGCCATTGTTGGCCCGGCGCCTGAACAGCGCTGACAGTCCGCCGCTGATCCGTACCACGCTTGACGCTGCGCTTCAGCGGCGCCTCGAAGACTTGCTGCTGGGCTGGCGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/669298‑669450 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcacCGCCATGCTCTGCGCCTCGACCACCAGAATGGCGGCCGA‑GGTACGCTCCGGCAGCCGTGCGCGCCAGCCCAGCAGCAAGTCTTCGAGGCGCCGCTGAAGCGCAGCGTCAAGCGTGGTACGGATCAGCGGCGGACTGTCAGCGCTGTT  <  NC_002947/669506‑669360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.