New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 683425	62 (1.030)	4 (0.070)	4/254	NT	6.8%	intergenic (‑153/+15)	PP_0584/PP_0585	methyl‑accepting chemotaxis transducer/MerR family metal‑sensitive transcriptional regulator
	?	NC_002947	= 683467	50 (0.860)					coding (384/411 nt)	PP_0585	MerR family metal‑sensitive transcriptional regulator

ACGCTCCCGGAATTTTTGTTTTCGACACACGAGGCAGGTAGCAACTGCATCGGCAGCATCCGGGTTTTATGAAGCCAAAACGCCCGTATTTATTGGATAAAGTCGTGGTTGGTGACTATTCGGTCGTGTTTGGACATTTATGGCATGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/683275‑683425 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaTGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCATGCCATAAATGTCCAAACACGACCGAATAGTCACCAACCACGACTTTATCCAATAAATACGGGCGTTTTGGCTTCATAAAACCCGGATGCTGCCGATG  <  NC_002947/683467‑683322                                                                                                                                                                                                                                                                                                           ACGCTCCCGGAATTTTTGTTTTCGACACACGAGGCAGGTAGCAACTGCATCGGCAGCATCCGGGTTTTATGAAGCCAAAACGCCCGTATTTATTGGATAAAGTCGTGGTTGGTGACTATTCGGTCGTGTTTGGACATTTATGGCATGC                                                                                                                                                       >  6:238259/1‑148                 TGTTTTCGACACACGAGGCAGGTAGCAACTGCATCGGCAGCATCCGGGTTTTATGAAGCCAAAACGCCCGTATTTATTGGATAAAGTCGTGGTTGGTGACTATTCGGTAGTGTTTCGACATTTATGGCATGCCAATGGCGCTGCAGG                                                                                                                                        >  3:233008/1‑147                                           AACTGCATCGGCAGCATCCGGGTTTTATGAAGCCAAAACGCCCGTATTTATTGGATAAAGTCGTGGTTGGTGACTATTCGGTCGTGTTTGGACATTTATGGCATGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGC                                                                                                            >  2:244965/1‑149                                                CATCGGCAGCATCCGTGTTTTATGAAGCCAAAACGCACGTATTTATTGTATAAAGTCGTGGTTGGTGACTATTCTTTCGGGTTTGGACATTTATGGCATGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTT                                                                                                        <  4:233008/148‑1                                                    GGCAGCATCCGGGTTTTATGAAGCCAAAACGCCCGTATTTATTGGATAAAGTCGTGGTTGGTGACTATTCGGTCGTGTTTGGACATTTATGGCATGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCAT                                                                                                   <  1:244965/149‑1                                                                                                                                                    CCAATGGGTCTGCAGGTTGCTGCTGTCACTGAGCTGCAACGCGCGTTTGGCATGCCATAAATGTCCAAACACGACCGAATAGTCACCAACCACGACTTTATCCAATAAATACGGGCGTTTTGGCTTCATAAAACCCGGATGCTGCCGAT   <  1:270405/149‑1                                                                                                                                                    CCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCATGCCATAAATGTCCAAACACGACCGAATAGTCACCAACCACGACTTTATCCAATAAATACGGGCGTTTTGGCTTCATAAAACCCGGATGCTGCCGAT   <  7:252904/149‑1                                                                                                                                                     CAATGGCGCTGCAGGTAGCTGCTGTCACTCAGCTGCCACGCGCCTTTGCCATGCCATAAATGTCCAAACACGACCGACTAGTCACCAACCACGACTTTATCCAATAAATACGGGCGTTTTGGCTTCATAAAACCCGGATGCTGCCGATG  <  3:220380/149‑1                                                                                                                                                                                                                                                                                                           ACGCTCCCGGAATTTTTGTTTTCGACACACGAGGCAGGTAGCAACTGCATCGGCAGCATCCGGGTTTTATGAAGCCAAAACGCCCGTATTTATTGGATAAAGTCGTGGTTGGTGACTATTCGGTCGTGTTTGGACATTTATGGCATGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/683275‑683425 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaTGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCATGCCATAAATGTCCAAACACGACCGAATAGTCACCAACCACGACTTTATCCAATAAATACGGGCGTTTTGGCTTCATAAAACCCGGATGCTGCCGATG  <  NC_002947/683467‑683322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.