| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 805730 = | 62 (1.030) | 6 (0.100) | 5/252 | NT | 9.4% | coding (1600/2832 nt) | PP_0693 | hypothetical protein |
| ? | NC_002947 | 805768 = | 56 (0.970) | coding (1562/2832 nt) | PP_0693 | hypothetical protein | |||||
CGCCCTGCGCGACCAGAAAGAGCGCCTGGAAAAAGAACTCAAGCAGCTCAAGACCCAGCAAGCCGTGGCCGCCGACCGCTCCGCCTCCAAAGCGCAGACCGAAACCCTGTACCAGGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/805881‑805730‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttccTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCTGCTTGAGTTCTTTTTCCAGGCGCTCTTTCTGGTCGCGCAGGGCGGCCCGGTCGGCCAGGGCCTGCAGTGCCGGCGG > NC_002947/805768‑805913 CGCCCTGCGCGACCAGAAAGAGCGCCTGGAAAAAGAACTCAAGCAGCTCAAGACCCAGCAAGCCGTGGCCGCCGACCGCTCCGCCTCCAAAGCGCAGACCGAAACCCTGTACCAGGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACT > 2:63036/1‑149CGCCCTGCGCGACCAGAAAGAGCGCCTGGAAAAAGAACTCAAGCAGCTCAAGACCCAGCAAGCCGTGGCCGCCGACCGCTCCGCCTCCAAAGCGCAGACCGAAACCCTGTACCAGGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACT > 4:16845/1‑149 GCCCTGCGCGACCAGAAAGAGCGCCTGGAAAAAGAACTCAAGCAGCTCAAGACCCAGCAAGCCGTGGCCGCCGACCGCTCCGCCTCCAAAGCGCAGACCGAAACCCTGTACCAGGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTT < 6:94953/149‑1 CAGGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCTGCTTGAGTTCTTTTTCCAGGCGCTCTTTCTGGTCGCG > 2:358485/1‑147 CAGGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCTGCTTGAGTTCTTTTTCCAGGCGCTCTTTCTGGTCGCG > 4:358941/1‑147 GGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCT > 5:238988/1‑108 GGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCT < 6:238988/108‑1 GAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGA < 1:301093/104‑1 GAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGA > 2:301093/1‑104 TTCCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCTGCTTGAGTTCTTTTTCCAGGCGCTCTTTCTGGTCGCGCAGGGCGGCCCGGTCGGCCAGGGCCTGCAGTGCCGGCG > 5:176996/1‑149 CCTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCTGCTTGAGTTCTTTTTCCAGGCGCTCTTTCTGGTCGCGCAGGGCGGCCCGGTCGGCCAGGGCCTGCAGTGCCGGCGG < 8:294660/148‑1 CGCCCTGCGCGACCAGAAAGAGCGCCTGGAAAAAGAACTCAAGCAGCTCAAGACCCAGCAAGCCGTGGCCGCCGACCGCTCCGCCTCCAAAGCGCAGACCGAAACCCTGTACCAGGAAGTGCTGGACGCGCAGAAGGCGCTGGAAGACTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/805881‑805730‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttccTGGTACAGGGTTTCGGTCTGCGCTTTGGAGGCGGAGCGGTCGGCGGCCACGGCTTGCTGGGTCTTGAGCTGCTTGAGTTCTTTTTCCAGGCGCTCTTTCTGGTCGCGCAGGGCGGCCCGGTCGGCCAGGGCCTGCAGTGCCGGCGG > NC_002947/805768‑805913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |