| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 969877 | 72 (1.200) | 4 (0.070) | 4/256 | NT | 5.5% | coding (790/1050 nt) | queA | S‑adenosylmethionine:tRNA ribosyltransferase‑isomerase |
| ? | NC_002947 | = 969908 | 67 (1.150) | coding (821/1050 nt) | queA | S‑adenosylmethionine:tRNA ribosyltransferase‑isomerase | |||||
GACAAGATCGAAGACCACCACATGCATAAAGAGTGGCTCGAAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCCGCGCGTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/969727‑969877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgTCGGTGTCGCCACTGAAGGCCTTGAGCACGCCATCACGCGCGGCGCTTTCCAGCGAACGCACACTGGTGGTGCCAACCGCGATCACCCGACCACCACGGGCCCGGCAGGCCTCGATGGCATCGACCACATCCTGGCCCACTTCGA < NC_002947/969908‑969764 GACAAGATCGAAGACCACCACATGCATAAAGAGTGGCTCGAAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCCGCGCGTGA < 2:259705/149‑1 ACAAGATCGAAGACCACCACATGCATAAAGAGTGGCTCGAAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCCGCGCGTGAT > 6:316570/1‑149 ACAAGATCGAAGACCACCACATGCATAAAGAGTGGCTCGAAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCCGCGCGTGAT > 7:31361/1‑149 CACCACATGCATAAAGAGTGGCTCGAAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCAGCGCGTGATGTCGGTGTCGCCAC > 1:47343/1‑149 TCGAAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCCGCGCGTGATGTCGGTGTCGCCACTGAAGGCCTTGAGCACGCCATC > 8:166173/1‑149 AAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCAGCGCGTGATGTCGGTGTCGCCACTGAAGGCCTTGAGCACGCCATCACG < 2:47343/149‑1 GGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCCGCGCGTGATGTCGGTGTCGCCACTGAAGGCCTTGAGCACGCCATCACGCGCG < 7:166173/148‑1 GATGTCGGTGTCGCCACTGAAGGCCTTGAGCACGCCATCACGCGCGGCGCTTTCCAGCGAACGCACACTGGTGGTGCCAACCGCGATCACCCGACCACCACGGGCCCGGCAGGCCTCGATGGCATCGACCACATCCTGGCCCACTTCGA < 3:143675/149‑1 GACAAGATCGAAGACCACCACATGCATAAAGAGTGGCTCGAAGTGGGCCAGGATGTGGTCGATGCCATCGAGGCCTGCCGGGCCCGTGGTGGTCGGGTGATCGCGGTTGGCACCACCAGTGTGCGTTCGCTGGAAAGCGCCGCGCGTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/969727‑969877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgTCGGTGTCGCCACTGAAGGCCTTGAGCACGCCATCACGCGCGGCGCTTTCCAGCGAACGCACACTGGTGGTGCCAACCGCGATCACCCGACCACCACGGGCCCGGCAGGCCTCGATGGCATCGACCACATCCTGGCCCACTTCGA < NC_002947/969908‑969764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |