| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1389285 | 51 (0.850) | 3 (0.050) | 3/248 | NT | 5.8% | intergenic (+41/‑161) | dps/PP_1211 | DNA‑binding stress protein/hypothetical protein |
| ? | NC_002947 | = 1389335 | 49 (0.870) | intergenic (+91/‑111) | dps/PP_1211 | DNA‑binding stress protein/hypothetical protein | |||||
GACGAGCCGACCGCCGACCTGCTGACGCAGCGCATGCAGGTTCACGAGAAAACCGCCTGGATGCTGCGGGTACTGCTCGACGACAAGTAACCGTTGCTCAAGGGGAAAGCTTGCGCAACCCCCGTGGGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1389155‑1389285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACCCGCAGCATCCAGGCGGTTTTCTCGTGAACCTGCAT < NC_002947/1389335‑1389188 GACGAGCCGACCGCCGACCTGCTGACGCAGCGCATGCAGGTTCACGAGAAAACCGCCTGGATGCTGCGGGTACTGCTCGACGACAAGTAACCGTTGCTCAAGGGGAAAGCTTGCGCAACCCCCGTG > 2:215475/1‑126GACGAGCCGACCGCCGACCTGCTGACGCAGCGCATGCAGGTTCACGAGAAAACCGCCTGGATGCTGCGGGTACTGCTCGACGACAAGTAACCGTTGCACAAGGGGAAAGCTTGCGCAACCCCCGTG < 1:215475/126‑1 CTGACGCAGCGCATGCAGGTTCACGAGAAAACCGCCTGGATGCTGCGGGTACTGCTCGACGACAAGTAACCGTTGCTCAAGGGGAAAGCTTGCGCAACCCCCGTGGGAGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCG > 5:376498/1‑149 GTTCACGAGAAAACCGCCTGGATGCTGCGGGTACTGCTCGACGACAAGTAACCGTTGCTCAAGGGGAAAGCTTGCGCAACCCCCGTGGGAGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCA < 3:150326/149‑1 TTCACGAGAAAACCGCCTGGATGCTGCGGGTACTGCTCGACGACAAGTAACCGTTGCTCAAGGGGAAAGCTTGCGCAACCCCCGTGGGAGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCAC < 6:376498/149‑1 TGGGAGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACCCGCAGCATCCAGGCGGTTTTCTCGTGAAC > 7:132058/1‑149 TGGGAGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACCCGCAGCATCCAGGCGGTTTTCTCGTGA < 1:97424/147‑1 GGAGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACACGCAGCATCCAGGCGGTTTTCTCGTGAACCT < 2:138479/149‑1 GAGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACCCGCAGCATCCAGGCGGTTTTCTCGTGAACCTG < 8:337319/149‑1 AGCAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGGTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACCCGCAGCATCCAGGCGGTTTTCTCGTGAACCTGC < 5:199722/149‑1 CAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACCCGCAGCATCCAGGCGGTTTTCTCGTGAACCTGCAT < 1:361054/149‑1 GACGAGCCGACCGCCGACCTGCTGACGCAGCGCATGCAGGTTCACGAGAAAACCGCCTGGATGCTGCGGGTACTGCTCGACGACAAGTAACCGTTGCTCAAGGGGAAAGCTTGCGCAACCCCCGTGGGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1389155‑1389285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcAGGCAATGCGGTGGATGGCACCGGCTGCGCCGGTGTTCGCGGGCACGCCCGCTCCCACGGGGGTTGCGCAAGCTTTCCCCTTGAGCAACGGTTACTTGTCGTCGAGCAGTACCCGCAGCATCCAGGCGGTTTTCTCGTGAACCTGCAT < NC_002947/1389335‑1389188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |