| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1812747 = | 66 (1.100) | 4 (0.070) | 4/252 | NT | 6.3% | coding (226/1116 nt) | frmA | glutathione‑dependent formaldehyde dehydrogenase |
| ? | NC_002947 | 1812797 = | 55 (0.960) | coding (276/1116 nt) | frmA | glutathione‑dependent formaldehyde dehydrogenase | |||||
GCGCGTGGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGCC‑TGGCACAGGTTGGTCTTGCCCGAGAGGCAGAACTTGCACTTGCCGCATTCCGGGGTGTACAGCGGGATGACGTGGTCACCCACGGCGAGCGAGGTCACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1812899‑1812747‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccccGGAATGCGGCAAGTGCAAGTTCTGCCTCTCGGGCAAGACCAACCTGTGCCAGGCCATCCGCGCCACTCAGGGCAAGGGCCTGATGCCGGACGGCACCACGCGCTTCTCGTACAAGGGC > NC_002947/1812797‑1812914 GCGCGTGGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGCCGGGGCACAGGTTGGTCTTGCCCGAGAGGCAGACGTTGCCGTTGCCGCATTCCGGGGGGTACAGCGGGATGCCGTGGTCACCCACGGCGCGCGAGGTC > 1:99037/1‑149 GCGTGGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGCC‑TGGCACAGGTTGGTCTTGCCCGAGAGGCAGAACTTGCACTTGCCGCATTCCGGGGTGTACAGCGGGATGACGTGGTCACCCACGGCGAGCGAGGTCACC > 4:186765/1‑149 CGCATTCCGGGGTGTACAGCGGGATGACGTGGTCACCCACGGCGAGCGAGGTCACCCCGGAATGCGGCAAGTGCAAGTTCTGCCTCTCGGGCAAGACCAACCTGTGCCAGGCCATCCGCGCCACTCAGGGCAAGGGCCTGATGCCGGAC > 5:344527/1‑149 GGGGTGTACAGCGGGAAGACGTGGTCACCCACGGCGAGCGAGGTCACCCCGGAATGCGGCAAGTGCAAGTTCTGCCTCTCGGGCAAGACCAACCTGTGCCAGGCCATCCGCGCCACTCAGGGCAAGGGCCTGATGCCGGACGGCACCAC > 1:6669/1‑149 TGTACAGCGGGAAGACGTGGTCACCCACGGCGAGCGAGGTCACCCCGGAATGCGGCAAGTGCAAGTTCTGCCTCTCGGGCAAGACCAACCTGTGCCAGGCCATCCGCGCCACTCAGGGCAAGGGCCTGATGCCGGACGGCACCACGCGC < 2:6669/149‑1 CGTGGTCACCCACGGCGAGCGAGGTCACCCCGGAATGCGGCAAGTGCAAGTTCTGCCTCTCGGGCAAGACCAACCTGTGCCAGGCCATCCGCGCCACTCAGGGCAAGGGCCTGATGCCGGACGGCACCACGCGCTTCTCGTACAAGGGC < 6:344527/149‑1 GCGCGTGGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGCC‑TGGCACAGGTTGGTCTTGCCCGAGAGGCAGAACTTGCACTTGCCGCATTCCGGGGTGTACAGCGGGATGACGTGGTCACCCACGGCGAGCGAGGTCACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1812899‑1812747‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccccGGAATGCGGCAAGTGCAAGTTCTGCCTCTCGGGCAAGACCAACCTGTGCCAGGCCATCCGCGCCACTCAGGGCAAGGGCCTGATGCCGGACGGCACCACGCGCTTCTCGTACAAGGGC > NC_002947/1812797‑1812914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |