New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1831129	60 (1.000)	4 (0.070)	3/256	NT	6.3%	coding (8/711 nt)	yfiP	hypothetical protein
	?	NC_002947	= 1831158	61 (1.040)					coding (37/711 nt)	yfiP	hypothetical protein

GGACCGGCACGGTAGAAGTCCGATTATAAGGAGCGCTTTGCTGGCTGCACAGCAATTGCCACCTGTTCTGGTAGACTGGCCGC‑CTTGTTTTTTCCGAGTCATCCTTGTGCCCATTTTCAATCTGTCCAGAGGCCTGCCGGCATGAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1830981‑1831129 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaGGCGTTCGGCGCGCAGACGCGCTACCGCATGGCTCATGCCGGCAGGCCTCTGGACAGATTGAAAATGGGCACAAGGATGACTCGGAAAAAACAAGGCGGCCAGTCTACCAGAACAGGTGGCAATTGCTGTGCAGCCAGCAAAGCGCT  <  NC_002947/1831158‑1831012                                                                                                                                                                                                                                                                                                           GGACCGGCACGGTAGAAGTCCGATTATAAGGAGCGCTTTGCTGGCTGCACAGCAATTGCCACCTGTTCTGGTAGACTGGCCGC‑CTTGTTTTTTCCGAGTCATCCTTGTGCCCATTTTCAATCTGTCCAGAGGCCTGCCGGCATGAGCCA                                                                                                                                                     <  3:190180/149‑1                                     TTTGCTGGCTGCACAGCAATTGCCACCTGTTCTGGTAGACAGGCCGCGCTTGTTTTTTCCGAGTCATCCTTGTGCCCATTTTCAATCTGTCCAGAGGCCTGCCGGCATGAGCCAGGCGTTCGGCGCGCAGACGCGCTACCGCATGGCT                                                                                                                   >  1:274167/1‑148                                       TGCTGGCTGCACAGCAATTGCCACCTGTTCTGGTAGACTGGCCGC‑CTTGTTTTTTCCGAGTCATCCTTGTGCCCATTTTCAATCTGTCCAGAGGCCTGCCGGCATGAGCCAGGCGTTCGGCGCGCAGACGCGCTACCGCATGGCTCAT                                                                                                                <  2:274167/148‑1                                              TGCACAGCAATTGCCACCTGTTCTGGTAGACTGGCCGC‑CTTGTTTTTTCCGAGTCATCCTTGTGCCCATTTTCAATCTGTCCAGAGGCCTGCCGGCATGAGCCAGGCGTTCGGCGCGCAGACGCGCTACCGCATGGtt                                                                                                                   >  5:224470/1‑136                                              TGCACAGCAATTGCCACCTGTTCTGGTAGACTGGCCGC‑CTTGCTTTTTCCGAGTCATCCTTGTGCCCATTTTCAATCTGTCCAGAGGCCTGCCGGCATGAGCCAGGCGTTCGGCGCGCAGACGCGCTACCGCATGGtt                                                                                                                   <  6:224470/138‑3                                                                                                                                                     CAGGCGTTCGGCGCGCAGACGCGCTACCGCATGGCTCATGCCGGCAGGCCTCTGGACAGATTGAAAATGGGCACAAGGATGACTCGGAAAAAACAAGGCGGCCAGTCTACCAGAACAGGTGGCAATTGCTGTGCAGCCAGCAAAGCGCT  >  4:267071/1‑149                                                                                                                                                                                                                                                                                                           GGACCGGCACGGTAGAAGTCCGATTATAAGGAGCGCTTTGCTGGCTGCACAGCAATTGCCACCTGTTCTGGTAGACTGGCCGC‑CTTGTTTTTTCCGAGTCATCCTTGTGCCCATTTTCAATCTGTCCAGAGGCCTGCCGGCATGAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1830981‑1831129 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaGGCGTTCGGCGCGCAGACGCGCTACCGCATGGCTCATGCCGGCAGGCCTCTGGACAGATTGAAAATGGGCACAAGGATGACTCGGAAAAAACAAGGCGGCCAGTCTACCAGAACAGGTGGCAATTGCTGTGCAGCCAGCAAAGCGCT  <  NC_002947/1831158‑1831012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.