New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2048794 = | 57 (0.950) | 3 (0.060) | 3/230 | NT | 6.9% | intergenic (+33/+106) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
? | NC_002947 | 2048885 = | 31 (0.590) | intergenic (+124/+15) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
GATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2048957‑2048794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaaggGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGG > NC_002947/2048885‑2049032 GATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTCACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCAC < 1:189477/148‑1 TGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCC < 4:156545/149‑1 ATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGC > 1:212789/1‑149 TGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCCCGCCCGCT > 6:336143/1‑149 GAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTC > 5:10491/1‑149 AGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTC < 5:209418/148‑1 TCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTAGCGGGCCCGCCCCCACCCA > 1:183698/1‑149 CAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCAC > 4:83631/1‑148 CCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCG > 2:40255/1‑116 GAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACT > 1:315255/1‑148 GAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGAAAGCGATGATTGCAGTGGCCTCCTACATC > 4:267652/1‑148 CTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTG < 7:76896/149‑1 ACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGG > 1:204321/1‑149 AAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCC > 8:312511/1‑149 GGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGG < 3:301277/149‑1 GATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTGTTCGCGGGCACGCCCGCTCCCACAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2048957‑2048794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaaggGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGG > NC_002947/2048885‑2049032 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |