New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2056387 =49 (0.810)4 (0.070) 3/250 NT 8.0% coding (294/1155 nt) PP_1831 membrane protein
?NC_002947 2056448 = 45 (0.790)coding (355/1155 nt) PP_1831 membrane protein

GCGGCCCAGGCCAACCACGGTGAGGATGAAACCGATCGAACCCCACAGACGTACCTGGCTGTAGCGCGACGTCTGCCCGTGCAGGTGGGCCAGGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2056540‑2056387
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaccCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGGTCACGATCATGG  >  NC_002947/2056448‑2056595
                                                                                                                                                                                                                                                                                                              
GCGGCCCAGGCCAACCACGGTGAGGATGAAACCGATCGAACCCCACAGACGTACCTGGCTGTAGCGCGACGTCTGCCCGTGCAGGTGGGCCAGGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCCA                                                                                                                                                           >  8:138568/1‑149
 CGGCCAAGGCCAACCAAGGTGAGGATGAAACCGCTCGAACCCCACAGACGTACCTGGCTGTATCGCCACGAATGCCCGTGCAGGTGTGACAGGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAAAGCGTGCAGGGCCA                                                                                                                                                           >  4:253280/1‑148
    CCCAGGCCAACCACGGTGAGGATGAAACCGATCGAACCCCACAGACGTACCTGGCTGTAGCGCGACGTCTGCCCGTGCAGGTGGGCCAGGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCCATCAC                                                                                                                                                       <  2:120999/149‑1
      CAGGCCAACCACGGTGAGGATGCAACCGATCGAACCCCACAGACGTACCTGGCTGTAGCGCGACGTCTGCCCGTGCAGGTGGGCCAGGGTGATGACCTCGACCTGCGGCCGCACCGCATGCCAGAAGAACGCGTGCAGGGCCATCAC                                                                                                                                                       >  2:307352/1‑147
                                                                                           AGGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCCATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCT                                                                >  7:5704/1‑149
                                                                                            GGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCCATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACCGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTG                                                               >  8:161868/1‑149
                                                                                            GGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCCATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTG                                                               >  8:225245/1‑149
                                                                                             GGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCGATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGG                                                              >  5:305376/1‑149
                                                                                                                                                   CATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGGTCACGA        <  6:305376/149‑1
                                                                                                                                                    ATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGATTGGTTGAGCCTGGACAGCTACCAGGGGGCGGGGGTCAggct       >  8:337166/1‑145
                                                                                                                                                    ATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGGTCACGAT       >  8:105669/1‑149
                                                                                                                                                    ATCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGGTCACGA        <  1:120999/148‑1
                                                                                                                                                     TCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGGTCACGATC      <  6:16177/149‑1
                                                                                                                                                     TCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGGTCACGAT       >  3:89334/1‑148
                                                                                                                                                     TCACCCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACAGTGGTTGGCCTGGGCCGCTTGGTCGAATGGGTGAGCCTGGACATCTACCCGGTGGCGCTGGTCCCGAT       >  8:257076/1‑148
                                                                                                                                                         CCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGTTCACGATCATGG  >  4:274608/1‑149
                                                                                                                                                                                                                                                                                                              
GCGGCCCAGGCCAACCACGGTGAGGATGAAACCGATCGAACCCCACAGACGTACCTGGCTGTAGCGCGACGTCTGCCCGTGCAGGTGGGCCAGGGTGATGACCTCGAACTGCGGCAGCACCGCATGCCAGAAGAACGCGTGCAGGGCCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2056540‑2056387
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaccCTGGCCCACCTGCACGGGCAGACGTCGCGCTACAGCCAGGTACGTCTGTGGGGTTCGATCGGTTTCATCCTCACCGTGGTTGGCCTGGGCCGCTTGTTCGAATGGTTGAGCCTGGACATCTACCCGGTGGCGCTGGTCACGATCATGG  >  NC_002947/2056448‑2056595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.