| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2086250 | NA (NA) | 6 (0.110) | 5/248 | NT | NA | coding (365/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | = 2086296 | NA (NA) | coding (411/1302 nt) | PP_1865 | transposase | |||||
CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086095‑2086250‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaaaaCCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < NC_002947/2086296‑2086149 CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA > 1:32863/1‑149CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA < 2:32863/149‑1CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA > 6:237912/1‑149CAAGAGCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTA < 4:111957/149‑1 AAGATCAGTCGAACCGAACCTGCCCTTTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC < 6:199345/149‑1 AAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC < 3:320832/149‑1 GATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAgat > 5:329003/1‑146 GATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCG < 5:237912/149‑1 GATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACC > 6:339892/1‑148 GATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACC > 6:255200/1‑148 ATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCAGCTCAGCCATGCTTCCTGATTGGCAAGTACGGCTGGTCGATGGCAGCCACTTGGCCTCTACCG > 8:277982/1‑148 TCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGA > 3:34281/1‑148 AGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA < 2:11949/149‑1 AGTCGAACCGAACCTGCCCTGTTGCGTGCGCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAA < 6:313866/148‑1 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACC > 6:172906/1‑149 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA < 1:322299/147‑1 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA > 2:322299/1‑147 TCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTAAGCAATTCTTCCTGATTGGCTAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAcagc > 6:175284/1‑145 CTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAA < 5:172906/149‑1 GGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTA < 7:165848/148‑1 ggGCCGACAATCCATGACTTTGGCTGCTCAGCCATGCTTCCTGATGCGCAAGTTCGGGTGGTCGACGCCAGCCACTTGGCATCTACCGAAAACCCGTGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGA < 4:213684/147‑1 GCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGA < 5:328505/149‑1 CGCCGACAATCCATGAGTTGGGCTGCGCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAG < 8:61709/149‑1 gcgGACAATCCATGAGTTGGGCTGCTCTGGCATGCTTGCTGATTGGCAAGTTGGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAACCCGGGGCGAGGCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGG < 4:133106/146‑1 GACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC > 4:118042/1‑81 GACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTAC < 3:118042/81‑1 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGTGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCC > 7:96885/1‑147 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAA > 7:76283/1‑149 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCC > 7:27931/1‑147 ACCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCC > 4:329952/1‑147 CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAG > 1:260567/1‑149 CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAG > 3:177629/1‑149 CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCAT < 3:133233/132‑1 CCGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCAT > 4:133233/1‑132 CCGAAAACCCGGGGCGAGACGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGAAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCAAGCCTGAGCAGCCCAACTCATGGATTGTCGGCCCCAAG > 7:12435/1‑149 CGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGC > 4:146060/1‑149 CGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCA < 5:315526/125‑1 CGAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCA > 6:315526/1‑125 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCG > 4:36001/1‑149 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCG < 1:377138/149‑1 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGA > 7:169606/1‑133 GAAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGA < 8:169606/133‑1 AAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGC < 5:93986/149‑1 AAAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGC > 8:97044/1‑149 AAACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCT < 7:66689/149‑1 AACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTG > 6:321736/1‑149 AACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTG > 5:266090/1‑149 ACCCGGTGCGAGCAGCTCCGCGCTCTTGGCTCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCTTGGATTGTCGGCGCCAAGCGCTGC < 7:56296/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < 5:65785/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < 4:354625/149‑1 ACCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC > 2:14184/1‑149 CAAGATCAGTCGAACCGAACCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086095‑2086250‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgaaaaCCCGGGGCGAGCCGCTCCGCGCTCTTGGCGCAACGCGCCAAGACGCTTTTCGGTAGAGGCCAAGTGGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGC < NC_002947/2086296‑2086149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |