| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2086546 = | NA (NA) | 4 (0.070) | 3/256 | NT | NA | coding (661/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | 2086577 = | NA (NA) | coding (692/1302 nt) | PP_1865 | transposase | |||||
ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086697‑2086546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTC > NC_002947/2086577‑2086722 ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 2:225564/1‑149ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG < 2:23269/149‑1 TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT > 7:16738/1‑149 TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT < 4:253823/149‑1 GCTCTCGGGCGGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG > 2:293720/1‑149 CTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG < 6:135455/148‑1 TCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG > 4:341103/1‑147 TCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG < 3:341103/147‑1 TCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG < 3:243538/145‑1 TCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 4:243538/1‑145 CATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG < 1:323850/123‑1 CATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGG > 2:323850/1‑123 GCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCC > 6:342892/1‑149 TCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCC > 2:235305/1‑148 TCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGA < 7:267561/137‑1 TCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGA > 8:267561/1‑137 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGATTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTC < 8:297526/149‑1 TGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTC > 1:96864/1‑149 GCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTC > 8:233038/1‑148 ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086697‑2086546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTC > NC_002947/2086577‑2086722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |