| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2308907 = | 54 (0.900) | 4 (0.070) | 4/258 | NT | 7.3% | coding (163/957 nt) | PP_2031 | hypothetical protein |
| ? | NC_002947 | 2308955 = | 49 (0.830) | coding (115/957 nt) | PP_2031 | hypothetical protein | |||||
ATGCCCACTGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2309057‑2308907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGG‑GCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCAC > NC_002947/2308955‑2309100 ATGCCCACTGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGG > 7:8705/1‑149ATGCCCACTGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGG < 8:346776/149‑1 CCCACTGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGC < 8:250759/148‑1 TGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCCGG‑GCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCC < 3:4921/139‑1 TGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCCGG‑GCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCC > 4:4921/1‑139 GCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCCGGAGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGG > 1:282607/1‑149 GGCCTGCACCATTCCAAGCTGCGCGGGCCGG‑GCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGA < 2:282607/149‑1 GGCCGG‑GCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCAC > 2:336779/1‑149 ATGCCCACTGCGCAGCTGGCCGAACACGGCATCCGCATTGGCCTTGCCGAGCTGATCGACATGCGCCACCGCGTGCGCGAAATCCAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2309057‑2308907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGG‑GCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTTCGGCCAGCTGCGCAGTGGGCATGGGTTCAGGCAACGGCGACGACGTCGAGGATGCGCTGGACCAC > NC_002947/2308955‑2309100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |