New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2500051 = | 47 (0.780) | 6 (0.110) | 5/248 | NT | 11.5% | coding (1952/2454 nt) | PP_2193 | ferric siderophore receptor |
? | NC_002947 | 2500082 = | 48 (0.850) | coding (1983/2454 nt) | PP_2193 | ferric siderophore receptor |
AGCCGCCGTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAATCGACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2500206‑2500051 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgacgtGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGCCGAGGACGGCGGCTGGATCAAGCGCGATGCCCGTTA > NC_002947/2500082‑2500228 AGCCGCCGTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAA < 3:54165/149‑1 GCCGCCGTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAAT < 6:324653/149‑1 CCGCCGTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAATC < 2:1629/149‑1 CCGCCGTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAATC < 5:66182/149‑1 CCGTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCCGCTCTTCCACGTCGATGGTCAGCGTTTGCGAATCGAC < 3:129325/149‑1 GTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAATCGACGT < 4:80292/149‑1 TCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGCGCAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAATCGACGT > 1:262630/1‑149 CTCTTCCACGTCGATGGTCAGCGTTTGCGAATCGACGTGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGC > 3:22305/1‑149 CACGTCGATGGTCAGCGTTTGCGAATCGACGTGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGG < 1:246403/110‑1 CACGTCGATGGTCAGCGTTTGCGAATCGACGTGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGG > 2:246403/1‑110 CGTCGATGGTCAGCGTTTGCGAATCGACGTGGAAGAGCAGAAAAGCCGCGACTTCGGCGAATGAAGGTGCACTCACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGCCGAGGcc > 1:109453/1‑147 CGTCGATGGTCAGCGTTTGCGAATCGACGTGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGCCGAGGACG > 8:11704/1‑149 GTCGATGGTCAGCGTTTGCGAATCGACGTGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGCCGAGGACGG > 8:68674/1‑149 ACGTGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGCCGAGGACGGCGGCTGGATCAAGCGCGATGCCCGT > 3:197091/1‑149 GTGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGCCGAGGACGGCGGCTGGATCAAGCGCGATGCCCGTTA > 2:170862/1‑149 AGCCGCCGTCCTCGGCCTCTTCCTCGGAGCGTGTCATGTGCAATGTGCCGC‑CAGCTTCCCAGCCGGTCTGGAAGTGCCGGGTCAGTGCACCTTCAAAGCCGAAGTCGCGGCTTTTCTGCTCTTCCACGTCGATGGTCAGCGTTTGCGAATCGACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2500206‑2500051 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgacgtGGAAGAGCAGAAAAGCCGCGACTTCGGC‑TTTGAAGGTGCACTGACCCGGCACTTCCAGACCGGCTGGGAAGCTGGCGGCACATTGCACATGACACGCTCCGAGGAAGAGGCCGAGGACGGCGGCTGGATCAAGCGCGATGCCCGTTA > NC_002947/2500082‑2500228 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |