New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2626960 = | 73 (1.210) | 4 (0.070) | 4/260 | NT | 5.2% | coding (45/1332 nt) | tig | trigger factor |
? | NC_002947 | 2627013 = | 73 (1.230) | coding (98/1332 nt) | tig | trigger factor |
GAAACGCTGACGGATCACGGTCATCGGTACTTTACCAGGACGGAAGCCCGCAATCTTGGCGCGCTTGGCAGTCTGCTGCAGACGCTTGTTGACTTCGTTCTCGACGCGCTCGGCCGGAACGGCGATGGTCATGCGGCGCTCGAGAGC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2627107‑2626960 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑c‑gAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTTTCGAGGCGGACGCCCGTCAAGAGGCTTTCGGTGACCTGGTCCAGGCCTCCTTCTA > NC_002947/2627013‑2627160 GAAACGCTGACGGATCACGGTCATCGGTACTTTACCAGGACGGAAGCCCGCAATCTTGGCGCGCTTGGCAGTCTGCTGCAGACGCTTGTTGACTTCGTTCTCGACGCGCTCGGCCGGAACGGCGATGGTCATGCGGCGCTCGAGAGC‑G < 6:106301/148‑1 ACTTCGTTCTCGACGCGCTCGGCCGGAACGGCGATGGTCATGCGGCGCTCGAGAGCGGAAGTCAACAAGCGTCTGCAGCAGACTGCCCAGCGCGCCAAGATTGCGGGCTTCAGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCG > 6:23008/1‑149 CTTCGTTCTCGACGCGCTCGGCCGGAACGGCGATGGTCATGCGGCGCTCGAGAGC‑GAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTT > 3:176441/1‑149 TTCGTTCTCGACGCGCTCGGCCGGAACGGCGATGGTCATGCGGCGCTCGAGAGC‑GAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTTT > 2:121243/1‑149 TCTCGACGCGCTCGGCCGGAACGGCGATGGTCATGCGGCGCTCGAGAGC‑GAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTTTCGAGG > 5:294494/1‑149 GAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTTTCGAGGCGGACGCCCGTCAAGAGGCTTTCGGTGACCTGGTCCAGGCCTCCTTCTA < 8:40408/149‑1 GAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTTTCGAGGCGGACGCCCGTCAAGAGGCTTTCGGTGACCTGGTCCAGGCCTCCTTCTA > 8:4471/1‑149 GAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTTTCGAGGCAGACGCCCGTCAAGAGGCTTTCGGTGACCTGGTCCAGGCCTCCTTCTA > 6:381016/1‑149 GAAACGCTGACGGATCACGGTCATCGGTACTTTACCAGGACGGAAGCCCGCAATCTTGGCGCGCTTGGCAGTCTGCTGCAGACGCTTGTTGACTTCGTTCTCGACGCGCTCGGCCGGAACGGCGATGGTCATGCGGCGCTCGAGAGC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2627107‑2626960 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑c‑gAAGTCAACAAGCGTCTGCAGCAGACTGCCAAGCGCGCCAAGATTGCGGGCTTCCGTCCTGGTAAAGTACCGATGACCGTGATCCGTCAGCGTTTCGAGGCGGACGCCCGTCAAGAGGCTTTCGGTGACCTGGTCCAGGCCTCCTTCTA > NC_002947/2627013‑2627160 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |