| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3013407 | 53 (0.880) | 4 (0.070) | 4/248 | NT | 7.4% | coding (643/708 nt) | PP_2634 | cellulose synthase |
| ? | NC_002947 | = 3013439 | 50 (0.880) | coding (675/708 nt) | PP_2634 | cellulose synthase | |||||
CGCTATGACCCGGCCAGCCGCTTGCAGAGCGACCTGTTGATGGTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3013257‑3013407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccgcCAGGCTTTGCACATCCCGGCAGGCCAGGCTCTGCGGTGCGTAAAGACCCAGGGGAGCCTTGTACGCCAGCGCTTCGAGGAAGGCTTCGTCGCGATGGACCACCTGGATCGGCAAGCGATCACGAAACAAGTCACGCCACACCATCAA < NC_002947/3013439‑3013293 CGCTATGACCCGGCCAGCCGCTTGCAGAGCGACCTGTTGATGGTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACC > 7:32067/1‑149 TATGACCCGGCCAGCCGCTTGCAGAGCGACCTGTTGATGGTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCG > 5:310881/1‑147 TATGACCCGGCCAGCCGCTTGCAGAGCGACCTGTTGATGGTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCG > 5:362228/1‑147 CCTGTTGATGGTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCGCCAGGCTTTGCACATCCCGGCAGGCCAGGCT > 5:237852/1‑149 CTGTTGATGGTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCGCCAGGCTTTGCACATCCCGGCAGGCCAGGCTC > 4:350336/1‑149 GTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCGCCAGGCTTTGCACATCCCGGCAGGCCAGGCTCTGCGGTGCG < 6:237852/149‑1 TGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCGCCAGGCTTTGCACATCCCGGCAGGCCAGGCTCTGCGGTGCGT < 3:350336/149‑1 GCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCA > 1:318571/1‑100 GCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCA < 2:318571/100‑1 GCACCGCCAGGCTTTGCACATCCCGGCAGGCCAGGCTCTGCGGTGCGTAAAGACCCAGGGGAGCCTTGTACGCCAGCGCTTCGAGGAAGGCTTCGTCGCGATGGACCACCTGGATCGGCAAGCGATCACGAAACAAGTCACGCCACAC > 7:203431/1‑148 CGCCAGGCTTTGCACATCCCGGCAGGCCAGGCTCTGCGGTGCGTAAAGACCCAGGGGAGCCTTGTACGCCAGCGCTTCGAGGAAGGCTTCGTCGCGATGGACCACCTGGATCGGCAAGCGATCACGAAACAAGTCACGCCACACCATC > 3:19090/1‑148 GCCAGGCTTTGCACATCCCGGCAGGCCAGGCTCTGCGGTGCGTAAAGACCCAGGGGAGCCTTGTACGCCAGCGCTTCGAGGAAGGCTTCGTCGCGATGGACCACCTGGATCGGCAAGCGATCACGAAACAAGTCACGCCACACCATCAA < 7:102226/149‑1 CGCTATGACCCGGCCAGCCGCTTGCAGAGCGACCTGTTGATGGTGTGGCGTGACTTGTTTCGTGATCGCTTGCCGATCCAGGTGGTCCATCGCGACGAAGCCTTCCTCGAAGCGCTGGCGTACAAGGCTCCCCTGGGTCTTTACGCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3013257‑3013407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccgcCAGGCTTTGCACATCCCGGCAGGCCAGGCTCTGCGGTGCGTAAAGACCCAGGGGAGCCTTGTACGCCAGCGCTTCGAGGAAGGCTTCGTCGCGATGGACCACCTGGATCGGCAAGCGATCACGAAACAAGTCACGCCACACCATCAA < NC_002947/3013439‑3013293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |