| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3323260 = | 52 (0.860) | 3 (0.050) | 3/252 | NT | 5.7% | coding (633/858 nt) | PP_2923 | hypothetical protein |
| ? | NC_002947 | 3323298 = | 49 (0.850) | coding (595/858 nt) | PP_2923 | hypothetical protein | |||||
GCCCACTTCGCCGACCGTCTGGGGCGTTTGCGCTGGTTGATTGCCACGCCACAGGATGGCATTCGCTTCGACGGCCAGTCGTTCGACTACCAGCGACAGTGCCCCGAGCCCTGGCGCCAGTGGGCCCGCAACGCCGAAGACCCCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3323409‑3323260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGTGGGCGCTGGCACTGTGCAGAATGTCGTGTGCCGGCTCGT > NC_002947/3323298‑3323444 GCCCCCTTCCCCCCCCGCCTGGGGCGCTTGCGCTGGTGGATTGCCCCGCCACAGGATGGCATTCGCTTCGACGGCCAGTCGTTCGCCTACCAGCGACAGTGCCCCGAGCCCTGGCGCCAGTGGGCCCGCAACGCCGAAGACCCCGGCGC < 4:306855/149‑1 CCTGGCGCCAGTGGGCCCGCAACGCCGAAGACCCCGGCGCCAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGT > 2:52069/1‑149 TGGCGCCAGTGGGCCCGCAACGCCGAAGACCCCGGCGCCAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGTGG > 1:20044/1‑149 GCGCCAGTGGGCCCGCAACGCCGAAGACCCCGGCGCCAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGTGGG < 2:20044/148‑1 GCCAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGTGGGCGCTGGCACTGTGCAGAATG > 1:142551/1‑134 GCCAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGTGGGCGCTGGCACTGTGCAGAATG < 2:142551/134‑1 CCAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGTGGGCGCTGGCACTGTGCAGAATGTCGTGTGCCGGCTCGT < 7:1055/149‑1 GCCCACTTCGCCGACCGTCTGGGGCGTTTGCGCTGGTTGATTGCCACGCCACAGGATGGCATTCGCTTCGACGGCCAGTCGTTCGACTACCAGCGACAGTGCCCCGAGCCCTGGCGCCAGTGGGCCCGCAACGCCGAAGACCCCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3323409‑3323260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccAGGGCTCGGGGCACTGTCGCTGGTAGTCGAACGACTGGCCGTCGAAGCGAATGCCATCCTGTGGCGTGGCAATCAACCAGCGCAAACGCCCCAGACGGTCGGCGAAGTGGGCGCTGGCACTGTGCAGAATGTCGTGTGCCGGCTCGT > NC_002947/3323298‑3323444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |