| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3446468 | 59 (0.980) | 4 (0.070) | 4/252 | NT | 6.8% | coding (862/1044 nt) | gpD | tail formation |
| ? | NC_002947 | = 3446522 | 53 (0.920) | coding (916/1044 nt) | gpD | tail formation | |||||
CCTGCCGCCGGTGCACACCGACCGTCATGTCTACCCCAACAAAACCTCTGCCCAGCAGGCCGCCAAGGCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGACCTGTTTGCCGAACGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3446317‑3446468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaCCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCGGCAAACAGGTCGGTGCGGCCGGGCATTTCCAGCCGCACGCCGGCGGTGCTGCGATTGAACGCAGCCAGGCGCGCCTTGGCGGC < NC_002947/3446522‑3446375 CCTGCCGCCGGTGCACACCGACCGTCATGTCTACCCCAACAAAACCTCTGCCCAGCAGGCCGCCAAGGCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGACCTGTTTGCCGAACGCT < 5:337141/149‑1CCTGCCGCCGGTGCACACCGACCGTCATGTCTACCCCAACAAAACCTCTGCCCAGCAGGCCGCCAAGGCGCGCCTGGCTGCGTTCAATCGAAGAACAGACGGCGTGCGGCTGGAAATGCCAGGACGCAAATAACTGTTTGCCTAAAGC > 3:301912/1‑148 GCCGCCGGTGCACACCGACCGTCATGTCTACCCCAACAAAACCTCTGCCCAGCAGGCCGCCAAGGCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGACCTGTTTGCCGAACGCTCGA > 8:168006/1‑149 GCCGGTCAACACCGACCGTCATGTCTACCCCAAAAAAACCTCAGCCCAGCAGGCCCACAATGCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCTTGCGGCAGGAAATGCCCGGCCGCACCGACCAGTTTTCCGAACGCTCcatc > 8:113264/1‑144 GACCGTCATGTCTACCCCAACAAAACCTCTGCCCAGCAGGCCGCCAAGGCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGCCCTGTTTGCCGAACGCTCGACCCCGTCCACCAGGTA > 8:320824/1‑149 GCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGACCTGTTTGCCGAACGCTCGACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAG > 3:165534/1‑144 GCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGACCTGTTTGCCGAACGCTCGACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAG < 4:165534/144‑1 CGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGACCTGTTTGCCGAACGCTCGACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCG < 7:320824/149‑1 GCTCGACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCGGCAAACAGGTCGGTGCGGCCGGGCATTTCCAGCCGCACGCCGGCGGTGCTGCGATTGAACGCAGCCAGGCGCGCCTTG > 8:276974/1‑149 CTCGACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCGGCAAACAGGTCGGTGCGGCCGGGCATTTCCAGCCGCACGCCGGCGGTGCTGCGATTGAACGCAGCCAGGCGCGCCTTG < 7:345182/148‑1 TCGACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCGGCAAACAGGTCGGTGCGGCCGGGCATTTCCAGCCGCACGCCGGCGGTGCTGCGATTGAACGCAGCCAGGCGCGCCTTGGC > 2:242504/1‑149 TCGACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCGGCAAACAGGTCGGTGCGGCCGGGCATTTCCAGCCGCACGCCGGCGGTGCTGCGATTGAACGCAGCCAGGCGCGCCTTGGC > 3:43360/1‑149 ACCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCGGCAAACAGGTCGGTGCGGCCGGGCATTTCCAGCCGCACGCCGGCGGTGCTGCGATTGAACGCAGCCAGGCGCGCCTTGGCGGC > 2:288503/1‑149 CCTGCCGCCGGTGCACACCGACCGTCATGTCTACCCCAACAAAACCTCTGCCCAGCAGGCCGCCAAGGCGCGCCTGGCTGCGTTCAATCGCAGCACCGCCGGCGTGCGGCTGGAAATGCCCGGCCGCACCGACCTGTTTGCCGAACGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3446317‑3446468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaCCCCGTCCACCAGGTACTCGCCATCGAGCCCCGGCTTGAAGCCTTGGGCGTTGATCGAGCGTTCGGCAAACAGGTCGGTGCGGCCGGGCATTTCCAGCCGCACGCCGGCGGTGCTGCGATTGAACGCAGCCAGGCGCGCCTTGGCGGC < NC_002947/3446522‑3446375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |