| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3587081 | 59 (0.980) | 4 (0.070) | 4/256 | NT | 6.7% | coding (1275/1329 nt) | benK | benzoate MFS transporter |
| ? | NC_002947 | = 3587128 | 55 (0.940) | coding (1322/1329 nt) | benK | benzoate MFS transporter | |||||
TACCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3586931‑3587081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcc‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGGGC < NC_002947/3587128‑3586981 TACCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGG > 3:95339/1‑149TACCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGG > 6:343634/1‑149 CGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCCGTGCACCTGGCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACG < 6:349478/149‑1 GCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCA < 8:121458/149‑1 TCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCAT < 1:50259/106‑1 TCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCAT > 2:50259/1‑106 GCC‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGG > 3:138565/1‑149 GCC‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGG > 6:223746/1‑149 CC‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGGG < 2:294971/149‑1 C‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGGGC > 2:134453/1‑149 C‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGGGC > 4:169383/1‑149 C‑TGCGCC‑‑GCCAGGGGCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGGGC < 6:318269/149‑1 TACCGGCCTGGGCTGGGCCTCGGGCATCGGCCGTAATGGCGCCATCGTCGGCCCGCTGCTGGGCGGTGCGCTGATGGGCATCAACCTGCCACTGCAACTCAATTTCATCGCCTTTGCCATCCCTGGCGCCATCGCTGCGCTGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3586931‑3587081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcc‑TGCGCC‑‑GCCAGGGTCTGGGCGTGGCGCCGACCACTGGCCAGGTGCACGGCCATGGCCAGCGCAGCGATGGCGCCAGGGATGGCAAAGGCGATGAAATTGAGTTGCAGTGGCAGGTTGATGCCCATCAGCGCACCGCCCAGCAGCGGGC < NC_002947/3587128‑3586981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |