| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3702504 | 52 (0.860) | 5 (0.090) | 5/252 | NT | 8.6% | coding (64/399 nt) | PP_3268 | MutT/nudix family protein |
| ? | NC_002947 | = 3702539 | 56 (0.970) | coding (29/399 nt) | PP_3268 | MutT/nudix family protein | |||||
GCGTTTCGTGGCGCATCAACAAAATCAGCGATTCAGCCTTTAGCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3702354‑3702504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacaaTCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGTAAGAAAGCCCAACGCGCCCTGGACCCTTCCAGGCGGCAAGATCGAGCCCGGCGAGACACCTATGCAGGCCGCCGAGCGGGAGTTGCTTGAAGAGACTGGGCTAAA < NC_002947/3702539‑3702392 GCGTTTCGTGGCGCATCAACAAAATCAGCGATTCAGCCTTTAGCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGTTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCA < 3:279176/148‑1GCGTTTCGTGGCGCATCAACAAAATCAGCGATTCAGCCTTTAGCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCA > 2:134607/1‑148GCGTTTCGTGGCGCATCAACAAAATCAGCGATTCAGCCTTTAGCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCA > 5:33960/1‑148GCGTTTCGTGGCGCATCAACAAAATCAGCGATTCAGCCTTTAGCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACC < 6:115215/146‑1 GCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCACAATCATTTGCCCGGCATGGCAAGCAGCGCCACAAATGGTTGT < 1:225929/149‑1 GCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCACAATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGT > 2:225929/1‑148 CCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGT‑CAGGGCGCGTTGGGCTTTCTTACCCACAATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGT < 8:154509/149‑1 GTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCACAATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGG < 1:337358/145‑1 GTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCACAATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGG > 2:337358/1‑145 CACAATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGTAAGAAAGCCCAACGCGCCCTGGACCCTTCCAGGCGGCAAGATCGAGCCCGGCGAGACACCTATGCAGGCCGCCGAGCGGGAGTTGCTTGAAGAGACTGGGC > 6:33960/1‑149 CACAATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGTAAGAAAGCCCAACGCGCCCTGGACCCTTCCAGGCGGCAAGATCGAGCCCGGCGAGACACCTATGCAGGCCGCCGAGCGGGAGTT > 3:85741/1‑132 CACAATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGTAAGAAAGCCCAACGCGCCCTGGACCCTTCCAGGCGGCAAGATCGAGCCCGGCGAGACACCTATGCAGGCCGCCGAGCGGGAGTT < 4:85741/132‑1 ATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGTAAGAAAGCCCAACGCGCCCTGGACCCTTCCAGGCGGCAAGATCGAGCCCGGCGAGACACCTATGCAGGCCGCCGAGCGGGAGTTGCTTGAAGAGACTGGGCTAAA < 3:17075/149‑1 ATCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGTAAGAAAGCCCAACGCGCCCTGGACCCTTCCAGGCGGCAAGATCGAGCCCGGCGAGACACCTAAGCAGGCCGCCGAGCGGGAGTTGCTTGAAGAGACTGGGCTA > 1:128277/1‑147 GCGTTTCGTGGCGCATCAACAAAATCAGCGATTCAGCCTTTAGCCCAGTCTCTTCAAGCAACTCCCGCTCGGCGGCCTGCATAGGTGTCTCGCCGGGCTCGATCTTGCCGCCTGGAAGGGTCCAGGGCGCGTTGGGCTTTCTTACCCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3702354‑3702504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacaaTCATTTG‑CCGGCATGGCAAGCAGCGCCACAAATGGTTGTGGGTAAGAAAGCCCAACGCGCCCTGGACCCTTCCAGGCGGCAAGATCGAGCCCGGCGAGACACCTATGCAGGCCGCCGAGCGGGAGTTGCTTGAAGAGACTGGGCTAAA < NC_002947/3702539‑3702392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |