New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3797797 | 75 (1.250) | 5 (0.090) | 4/252 | NT | 6.4% | coding (197/1449 nt) | vdh | vanillin dehydrogenase |
? | NC_002947 | = 3797886 | 74 (1.290) | coding (108/1449 nt) | vdh | vanillin dehydrogenase |
CGTGGTCATGGCTGCAGCCTCGCGCAGCATGTTGGCGGCCAACTTCACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3797646‑3797797 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC‑CAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAGCCGCTTGCTGGCAGGCGCTGATCTGTTGCAGGCGAGGGCCGCCGAGTTCATCG < NC_002947/3797886‑3797741 CGTGGTCATGGCTGCAGCCTCGCGCAGCATGTTGGCGGCCAACTTCACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGG > 1:134998/1‑148 GTGGTCATGGCTGCAGCCTCGCGCAGCATGTTGGCGGCCAACTTCACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGCg > 6:228948/1‑148 GGTCATGGCTGCAGCCTCGCGCAGCATGTTGGCGGCCAACTTCACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGCTGC > 7:290171/1‑149 CAGCCTCGCGCAGCATGTTGGCGGCCAACTTCACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGC‑GCAGCCGCttgctg < 5:228948/149‑7 GGCGGCCAACTTCACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGCTGCCGCCGCCACACTGGCCGATGCCGATGCCGC > 8:343633/1‑149 CACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCGTGCCAGCAAGCGGCTGCCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC > 8:259327/1‑149 GATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGCTGCCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC‑CAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAG < 7:259327/149‑1 CTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGCTGCCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC‑CAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAGCCGCTT < 7:343633/149‑1 CTGCCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC‑CAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAGCCGCTTGCTGGCAGGCGCTGATCTGTTGCAGGCGAGGGCCGCCGAGTTCATC < 1:212071/149‑1 TGCCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGCACAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAGCCGCTTGCTGGCAGGCGCTGATCTGTTGCAGGCGA > 1:267375/1‑132 TGCCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC‑CAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAGCCGCTTGCTGGCAGGCGCTGATCTGTTGCAGGCGAGGGCCGCCGAGTTCATCG > 7:336615/1‑149 TGCCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC‑CAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAGCCGCTTGCTGGCAGGCGCTGATCTGTTGCAGGCGA < 2:267375/131‑1 CGTGGTCATGGCTGCAGCCTCGCGCAGCATGTTGGCGGCCAACTTCACGTTGAAGCCATACCAGTTGGCCATGGCCCCGGTTTCACCGGCGGCGGCGATGAACTCGGCGGCCCTCGCCTGCAACAGATCAGCGCCTGCCAGCAAGCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3797646‑3797797 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcCGCCGCCACACTGGCCGATGCCGATGCCGCGGTGGCTGCTGC‑CAGCGCGGCGTTTCCGGCCTGGGCCGCCCTGGCACCGGGCGAGCGGCGCAGCCGCTTGCTGGCAGGCGCTGATCTGTTGCAGGCGAGGGCCGCCGAGTTCATCG < NC_002947/3797886‑3797741 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |