New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3837200	66 (1.100)	4 (0.070)	4/250	NT	5.5%	coding (795/2673 nt)	PP_3388	hypothetical protein
	?	NC_002947	= 3837224	75 (1.320)					coding (819/2673 nt)	PP_3388	hypothetical protein

GGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3837047‑3837200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcattGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGATGGCATCTTCGATGACGATGGCGGCGCCACGGGGTTTGGTCTGGTTCACCGGCGGCGCCAGGGCCAGGCGTGAGGCGTGGGGCGAGACGATCTGGTCGTTGTTGAACGGCTGCAG  <  NC_002947/3837224‑3837078                                                                                                                                                                                                                                                                                                               GGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCG                                                                                                                                                          <  6:249349/149‑1  GACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGG                                                                                                                                                         >  5:198643/1‑149    CGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCA                                                                                                                                                       <  1:202824/149‑1    CGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCA                                                                                                                                                       <  8:293705/149‑1                                       CGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGAT                                                                                                                    <  2:234803/149‑1                                        GTTCAACAACGACCAGCTCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGATG                                                                                                                   <  7:42876/149‑1                                                               CGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGATGG                                                                                                                  <  7:61933/127‑1                                                               CGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGATGG                                                                                                                  >  8:61933/1‑127                                                                                                                                                       CATTGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGATGGCATCTTCGATGACGATGGCGGCGCCACGGGGTTTGGTCTGGTTCACCGGCGGCGCCAGGGCCAGGCGTGGGGCGTGGGGCGAGACGATCTGGTCGTTGTTGAACGGCTGC    <  4:92404/149‑1                                                                                                                                                         TTGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGATGGCATCTTCGATGACGATGGCGGCGCCACGGGGTTTGGTCTGGTTCACCGGCGGCGCCAGGGCCAGGCGTGAGGCGTGGGGCGAGACGATCTGGTCGTTGTTGAACGGCTGCAG  >  8:286875/1‑149                                                                                                                                                                                                                                                                                                               GGACGATGCCGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCGCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3837047‑3837200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcattGCGCCAGGCGTTGAGCTCCTGGGTAATGCCGATGGCATCTTCGATGACGATGGCGGCGCCACGGGGTTTGGTCTGGTTCACCGGCGGCGCCAGGGCCAGGCGTGAGGCGTGGGGCGAGACGATCTGGTCGTTGTTGAACGGCTGCAG  <  NC_002947/3837224‑3837078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.