| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3837888 | NA (NA) | 4 (0.070) | 4/256 | NT | 6.6% | coding (1483/2673 nt) | PP_3388 | hypothetical protein |
| ? | NC_002947 | = 3837960 | 58 (0.960) | coding (1555/2673 nt) | PP_3388 | hypothetical protein | |||||
TGCGTGATCGGCATGGAGTTGAGTGAAGGGGGCACGAAGGTACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCagga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3837777‑3837888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGCAGCGCCGCCAGTTCTTCCCGCAGGTCCTCCTGGTTGTAGGTGATGCCGCGTATTGCCAGGTTGCCCCGGTCTGCCACGTCACTGCGCCACCAGTGGTCCAGTACCTTC < NC_002947/3837960‑3837812 TGCGTGATCGGCATGGAGTTGAGTGAAGGGGGCACGAAGGTACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCAGGA > 3:179741/1‑116TGCGTGATCGGCATGGAGTTGAGTGAAGGGGGCACGAAGGTACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCAGGA < 4:179741/116‑1 AAGGTACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCAGGATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGCAGCGCCGCCAGTTCTTCCCGCAGGTCCTCCTG < 5:229103/149‑1 GGTACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCAGGATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGCAGCGCCGCCAGTTCTTCCCGCAGGTCCTCCTGGT < 1:12787/149‑1 TACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCAGGATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGTAGC < 7:189275/116‑1 TACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCAGGATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGTAGC > 8:189275/1‑116 AGGATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGCAGCGCCGCCAGTTCTTCCCGCAGGTCCTCCTGGTTGTAGGTGATGCCGCGTATTGCCAGGTTGCCCCGGTCTGCCACGTCACTGCGCCACCAGTGGTCCAGTACCTTC > 3:310136/1‑149 GATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGCAGCGCCGCCAGTTCTTCCCGCAGGTCCTCCTGGTTGTAGGTGATGCCGCGTATTGCCAGGTTGCCCCGGTCTGCCACGTCACTGCGCCACCAGTGGTCCAGT < 3:130448/141‑1 GATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGCAGCGCCGCCAGTTCTTCCCGCAGGTCCTCCTGGTTGTAGGTGATGCCGCGTATTGCCAGGTTGCCCCGGTCTGCCACGTCACTGCGCCACCAGTGGTCCAGT > 4:130448/1‑141 TGCGTGATCGGCATGGAGTTGAGTGAAGGGGGCACGAAGGTACTGGACCACTGGTGGCGCAGTGACGTGGCAGACCGGGGCAACCTGGCAATACGCGGCATCACCTACAACCagga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3837777‑3837888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGATGACGCTGACGGCGGTTCGGCCTTGGCGGCTTCCAGCAGCGCCGCCAGTTCTTCCCGCAGGTCCTCCTGGTTGTAGGTGATGCCGCGTATTGCCAGGTTGCCCCGGTCTGCCACGTCACTGCGCCACCAGTGGTCCAGTACCTTC < NC_002947/3837960‑3837812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |