| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3916974 = | 63 (1.050) | 4 (0.070) | 4/248 | NT | 6.1% | coding (756/3129 nt) | mexB | multidrug resistance protein MexB |
| ? | NC_002947 | 3917021 = | 64 (1.130) | coding (803/3129 nt) | mexB | multidrug resistance protein MexB | |||||
GGTAGCGGTTTCCATGGCGTTGGCGCCGGGTGACAACTGCACGCTGAAGGCCGTGGCCGGTTTGCCGTTCAGGCGCGTGCCGTACTGGTATTCCTGGGCACCGATTTCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3917127‑3916974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggttgAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGAACGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCATGGAAACCGCTACCCTGGTACGGGCGAAGATGCAGGACCTGGCGCGCTACTTCC > NC_002947/3917021‑3917167 GGTAGCGGTTTCCATGGCGTTGGCGCCGGGTGACAACTGCACGCTGAAGGCCGTGGCCGGTTTGCCGTTCAGGCGCGTGCCGTACTGGTATTCCTGGGCACCGATTTCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCG < 5:127968/149‑1 GTAGCGGTTTCCATGGCGTTGGCGCCGGGTGACAACTGCACGCTGAAGGCCGTGGCCGGTTTGCCGTTCAGGCGCGTGCCGTACTGGTATTCCTGGGCACCGATTTCAAGCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGG < 7:101066/149‑1 GTAGCGGTTTCCATGGCGTTGGCGCCGGGTGACAACTGCACGCTGAAGGCCGTGGCCGGTTTGCCGTTCAGGCGCGTGCCGTACTGGTATTCCTGGGCACCGATTTCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGG < 8:231882/149‑1 GGCGCGTGCCGTACTGGTATTCCTGGGCACCGATTTCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTG < 5:227627/83‑1 GGCGCGTGCCGTACTGGTATTCCTGGGCACCGATTTCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTG > 6:227627/1‑83 AACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGACCGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCATGGAAACC > 5:183854/1‑147 AACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGAACGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCATGGAAACC < 6:183854/147‑1 ACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGAACGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCAT < 3:154352/139‑1 ACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTGAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGAACGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCAT > 4:154352/1‑139 GTTGAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGAACGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCATGGAAACCGCTACCCTGGTACGGGCGAAGATGCAGGACCTGGCGCGCTACTT > 4:107859/1‑149 TGAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGAACGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCATGGAAACCGCTACCCTGGTACGGGCGAAGATGCAGGACCTGGCGCGCTACTTCC > 7:238062/1‑149 GGTAGCGGTTTCCATGGCGTTGGCGCCGGGTGACAACTGCACGCTGAAGGCCGTGGCCGGTTTGCCGTTCAGGCGCGTGCCGTACTGGTATTCCTGGGCACCGATTTCAACCCGGGCGACATCCCCGATGGTGACCGTGGAGCCGTCCGGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3917127‑3916974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggttgAAATCGGTGCCCAGGAATACCAGTACGGCACGCGCCTGAACGGCAAACCGGCCACGGCCTTCAGCGTGCAGTTGTCACCCGGCGCCAACGCCATGGAAACCGCTACCCTGGTACGGGCGAAGATGCAGGACCTGGCGCGCTACTTCC > NC_002947/3917021‑3917167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |