| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4140591 = | 53 (0.880) | 6 (0.110) | 4/244 | NT | 11.1% | coding (219/597 nt) | PP_5609 | hypothetical protein |
| ? | NC_002947 | 4140641 = | 47 (0.840) | coding (269/597 nt) | PP_5609 | hypothetical protein | |||||
GCGCTTGTTGGTGAAGCTCAGGTAGCTCTTGGCCTGTACCGCCTCGCGGTAGTGGTTGCCGAAGCGCAGGGTATGGATCACGGCCGAGGCGTGCTCGATTTCGCCATCGGCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4140747‑4140591‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcgccgATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGATCCCGATGATGCA > NC_002947/4140641‑4140785 GCGCTTGTTGGTGAAGCTCAGGTAGCTCTTGGCCTGTACCGCCTCGCGGTAGTTGGTGCCGAAGCGCAGGGTATGGATCACGGCCGAGGCGTGCTCGATTTCGCCATCGGCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGT < 5:132343/149‑1GCGCTTGTTGGTGAAGCTCAGGTAGCTCTTGGCCTGTACCGCCTCGCGGTAGTGGTTGCCGAAGCGCAGGGTATGGATCACGGCCGAGGCGTGCTCGATTTCGCCATCGGCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGT > 4:288718/1‑149 CCATCGGCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTT > 4:261626/1‑148 GCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAA > 2:251406/1‑148 GCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAA > 5:382417/1‑148 GCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAG < 5:8969/122‑1 GCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAG > 6:8969/1‑122 CGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCG < 6:382417/149‑1 GTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGATCCCGAT < 7:315556/149‑1 GTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGATCCCGAT < 7:95299/149‑1 GTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGATCCCGA < 8:60387/148‑1 CGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTGGATCCAGATCCCGATGA > 2:251612/1‑149 GCCGATTGCGAAATCGAGCACGACTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGATCCCGATGATGCA < 3:41844/149‑1 GCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGATCCCGATGATG > 8:268430/1‑147 CCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGCTCCCGATGATG > 4:281181/1‑146 GCGCTTGTTGGTGAAGCTCAGGTAGCTCTTGGCCTGTACCGCCTCGCGGTAGTGGTTGCCGAAGCGCAGGGTATGGATCACGGCCGAGGCGTGCTCGATTTCGCCATCGGCGCCGACGACGGCGGCCTTACCGTAGGCCTCGATCTTGTCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4140747‑4140591‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcgccgATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGCCCAGGCACTTCGATCCAGATCCCGATGATGCA > NC_002947/4140641‑4140785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |