New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4420490	54 (0.900)	4 (0.070)	4/242	NT	7.1%	coding (240/1662 nt)	PP_3912	DNA‑cytosine methyltransferase
	?	NC_002947	= 4420508	55 (1.000)					coding (258/1662 nt)	PP_3912	DNA‑cytosine methyltransferase

TGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGG‑TCGGCGGCACGCCCTGCCAGGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4420337‑4420490 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggccttcTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACA  <  NC_002947/4420508‑4420364                                                                                                                                                                                                                                                                                                              TGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGG‑TCGGCGGCACGCCCTGCCAG                                                                                                                                                         <  8:68835/148‑1    CGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGG‑TCGGCGGCACGCCCTGCCAGGCCT                                                                                                                                                     >  4:160610/1‑149                                   GCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGG‑TCGGCGGCACGCCCTGCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCT                                                                                                                         <  8:86180/146‑1                                       ACCACTACCCCGCTACGCCCCACCACGGCGACATGCCCCGCCTGGCATCCATGGGGCCGTCCGGCAAGCATCCACCCCCCGACGGGCTGGTTCGGCGGCACGCCCTGCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCA                                                                                                                     <  1:292577/147‑1                                                               ACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGG‑TCGGCGGCACGCCCTGCCAGGCCTTCTCGCATGCCGGCCACACTGAAGGCCTGGCAG                                                                                                                    >  3:192342/1‑123                                                               ACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGG‑TCGGCGGCACGCCCTGCCAGGCCTTCTCGCATGCCGGCCACACTGAAGGCCTGGCAG                                                                                                                    <  4:192342/123‑1                                                                                                                                                 GCCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGC         >  6:112975/1‑149                                                                                                                                                  CCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCC        <  5:112975/149‑1                                                                                                                                                  CCAGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGC         >  3:339619/1‑148                                                                                                                                                    AGGCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGC         >  8:146/1‑146                                                                                                                                                      GCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAA    >  6:18790/1‑149                                                                                                                                                      GCCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAA    >  6:20750/1‑149                                                                                                                                                       CCTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAAC   <  1:295987/149‑1                                                                                                                                                        CTTCTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACA  <  4:339619/149‑1                                                                                                                                                                                                                                                                                                              TGCCGAGATCGAGCCATTCCCCTGCGCTGTTCTGGCTCACCACTACCCCGCTACGCCGAACCACGGCGACATGACCCGCCTGGCAGCCATGGTGCTGTCCGGCAAGATTCCAGCGCCCGAGGTGCTGG‑TCGGCGGCACGCCCTGCCAGGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4420337‑4420490 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggccttcTCGCATGCCGGCCACGCTGAAGGCCTGGCAGGGCGTGCCGCCGACCAGCACCTCGGGCGCTGGAATCTTGCCGGACAGCACCATGGCTGCCAGGCGGGTCATGTCGCCGTGGTTCGGCGTAGCGGGGTAGTGGTGAGCCAGAACA  <  NC_002947/4420508‑4420364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.