| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4453361 = | 57 (0.950) | 3 (0.050) | 3/250 | NT | 5.6% | coding (2965/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
| ? | NC_002947 | 4453411 = | 47 (0.820) | coding (3015/3564 nt) | nicB | nicotinate dehydrogenase subunit B | |||||
AAGCTCACTGACCACCGGGCCCATGGGGCCGGCCGCCACGCCGTGTTTTTCGGAGAAGCCGGTGCTGAGGTAGTTGAACAACTCGTCTTCGCTCCACGGCGTCGATGACTTGCCCAGGGCATTCAAGGCCGGGGCCTCCCAGCCATCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4453510‑4453361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgacGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGTCAGTGAGCTTGCCACCCTGCCAAAAAGCGACGTGCGCGCCATCGCCCACTACCTCA > NC_002947/4453411‑4453556 AAGCTCACTGACCACCGGGCCCATGGGGCCGGCCGCCACGCCGTGTTTTTCGGAGAAGCCGGTGCTGAGGTAGTTGAACAACTCGTCTTCGCTCCACGGCGTCTATGACTTGCCCAGGGCATTCAAGGCCGGGGCCTCCCAGCCATCGA < 1:268293/149‑1AAGCTCACTGACCACCGGGCCCATGGGGCCGGCCGCCACGCCGTGTTTTTCGGAGAAGCCGGTGCTGAGGTAGTTGAACAACTCGTCTTCGCTCCACGGCGTCGATGACTTGCCCAGGGCATTCAAGGCCGGGGCCTCCCAGCCATCGA > 5:52525/1‑149 GGCGTCGATGACTTGCCCAGGGCATTCAAGGCCGGGGCCTCCCAGCCATCGACGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGTCAGTGA < 5:260028/149‑1 GGCGTCGATGACTTGCCCAGGGCATTCAAGGCCGGGGCCTCCCAGCCATCGACGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGGCAGT > 6:260028/1‑147 GCGTCGATGACTTGCCCAGGGCATTCAAGGCCGGGGCCTCCCAGCCATCGACGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGTCAGTGAG > 3:202117/1‑149 GACGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGTCAGTGAGCTTGCCACCCTGCCAAAAAGCGACGTGCGCGCCATCGCCCACTACCTCA < 1:363014/149‑1 GACGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGTCAGT < 3:141212/97‑1 GACGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGTCAGT > 4:141212/1‑97 AAGCTCACTGACCACCGGGCCCATGGGGCCGGCCGCCACGCCGTGTTTTTCGGAGAAGCCGGTGCTGAGGTAGTTGAACAACTCGTCTTCGCTCCACGGCGTCGATGACTTGCCCAGGGCATTCAAGGCCGGGGCCTCCCAGCCATCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4453510‑4453361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgacGCCGTGGAGCGAAGACGAGTTGTTCAACTACCTCAGCACCGGCTTCTCCGAAAAACACGGCGTGGCGGCCGGCCCCATGGGCCCGGTGGTCAGTGAGCTTGCCACCCTGCCAAAAAGCGACGTGCGCGCCATCGCCCACTACCTCA > NC_002947/4453411‑4453556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |