New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4510837	53 (0.880)	5 (0.090)	4/250	NT	8.6%	coding (952/1326 nt)	rarA	DNA‑dependent ATPase
	?	NC_002947	= 4510858	56 (0.980)					coding (931/1326 nt)	rarA	DNA‑dependent ATPase

CATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4510687‑4510837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgccTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGCTGG  <  NC_002947/4510858‑4510711                                                                                                                                                                                                                                                                                                             CATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTG                                                                                                                                                        <  3:346228/149‑1           GTGCAACGGCACCTCCAGCGAAGAGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGT                                                                                                                                              >  7:237019/1‑149                               AACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCC                                                                                                                          <  8:237019/149‑1                                   GTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGA                                                                                                                      <  7:47341/149‑1                                              CTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCC                                                                                                                          >  3:27565/1‑134                                              CTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCCTGGGATGTGCAGGAGCGCCTTGGCAGCC                                                                                                                          <  4:27565/134‑1                                                                                                                                                       CTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGCTGG  <  4:214356/149‑1                                                                                                                                                                                                                                                                                                             CATTGCGCAGGTGCAACGGCACCTCCAGCGAACCGTGCTCGGCCGCTTCACGCAGGGCGGTCTTGAAACCCACGTACACCGCGTTGCTCTTGGGTGCGCAGGCCAGGTAGGTGATGGCCTGGGCCACCGCCAACTCGCCCTCGGGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4510687‑4510837 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgccTGGGATGTGCAGGAGCGCCTTGGCAGCCCCGAGGGCGAGTTGGCGGTGGCCCAGGCCATCACCTACCTGGCCTGCGCACCCAAGAGCAACGCGGTGTACGTGGGTTTCAAGACCGCCCTGCGTGAAGCGGCCGAGCACGGTTCGCTGG  <  NC_002947/4510858‑4510711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.