| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4659716 | 87 (1.440) | 4 (0.070) | 4/252 | NT | 5.0% | coding (74/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F |
| ? | NC_002947 | = 4659784 | 68 (1.180) | coding (142/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F | |||||
TCCGGCACTGATGATCGACGACGACACCTTCGGTGA‑CGTGCAGCCGGCTGGCGTTTCCAAACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4659565‑4659716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctTGCGGGCTGCGGCGTAGCCGTTCTTCGATTCGTACTCGGCCAGCCAGACCGGCTCGCCGTCGTCACGCAGGCGCCAGGTCAGCGGGTGGGTTTCGGCCGAGCGCGCGATGCGGTTGGCCGGGCCGAAGGAAGTAATGGTCATACG < NC_002947/4659784‑4659640 TCCGGCACTGATGATCGACGACGACACCTTCGGTGAGCGTGCAGCCGGCTGGCGTTTCCAAACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGC > 1:252244/1‑149TCCGGCACTGATGATCGACGACGACACCTTCGGTGA‑CGTGCAGCCGGCTGGCGTTTCCAAACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCG > 3:101749/1‑149 CGGCACTGATGATCGACGACGACACCTTCGGTGA‑CGTGCAGCCGGCTGGCGTTTCCAAACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCGCC > 7:64685/1‑149 CAGCCGGCTGGCGTTTCCAAACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCGCCTTGCGGGCTGCGGCGTAGCCGTTCTTCGATTCGTACTC > 1:201324/1‑149 TTTCCAAACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCGCCTTGCGGGCTGCGGCGTAGCCGTTCTTCGATTCGTACTCGGCCAGCCAGACC > 2:104954/1‑149 ACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCGCCTTGCGGGCTGCGGCGTAGCCGTTCTTCGATTCGTACTCGGCCAGCCAGACCGGCTCGC < 2:201324/149‑1 CGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCGCCTTGCGGGCTGCGGCGTAGCCGTTCTTCGATTCGTACTCGGCCAGCCAGACCGGCTCGCCGTCGTCACGCAGGC < 1:104954/149‑1 GCCTTGCGGGCTGCGGCGTAGCCGTTCTTCGATTCGTACTCGGCCAGCCAGACCGGCTCGCCGTCGTCACGCAGGCGCCAGGTCAGCGGGTGGGTTTCGGCCGAGCGCGCGATGCGGTTGGCCGGGCCGAAGGAAGTAATGGTCATACG > 3:114473/1‑149 TCCGGCACTGATGATCGACGACGACACCTTCGGTGA‑CGTGCAGCCGGCTGGCGTTTCCAAACTGCTGGAGGGTTACGTATGACCATTACTTCCTTCGGCCCGGCCAACCGCATCGCGCGCTCGGCCGAAACCCACCCGCTGACCTGGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4659565‑4659716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctTGCGGGCTGCGGCGTAGCCGTTCTTCGATTCGTACTCGGCCAGCCAGACCGGCTCGCCGTCGTCACGCAGGCGCCAGGTCAGCGGGTGGGTTTCGGCCGAGCGCGCGATGCGGTTGGCCGGGCCGAAGGAAGTAATGGTCATACG < NC_002947/4659784‑4659640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |