| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4701334 = | 64 (1.060) | 3 (0.050) | 3/252 | NT | 5.2% | coding (61/558 nt) | kdpC | potassium‑transporting ATPase subunit C |
| ? | NC_002947 | 4701380 = | 49 (0.850) | coding (15/558 nt) | kdpC | potassium‑transporting ATPase subunit C | |||||
CGGGCTGGGTGGCATTGTGGTGCCGTTTGCCGGGATCAAGCTGATCGACCTGCTGCTCAACGCCCTGAACCTGGTCTGAGGAGGCCGCCATGACTGCTTATCTACGCCCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4701483‑4701334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTA > NC_002947/4701380‑4701485 CGGGCTGGGTGGCATTGTGGTGCCGTTTGCCGGGATCAAGCTGATCGACCTGCTGCTCAACGCCCTGACCCTGGTCTGAGGAGGCCGCCATGACTGCTTATCTACGCCCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACG < 5:161934/146‑1CGGGCTGGGTGGCATTGTGGTGCCGTTTGCCGGGATCAAGCTGATCGACCTGCTGCTCAACGCCCTGAACCTGGTCTGAGGAGGCCGCCATGACTGCTTATCTACGCCCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACGGGC < 6:325066/149‑1CGGGCTGGGTGGCATTGTGGTGCCGTTTGCCGGGATCAAGCTGATCGACCTGCTGATCAACGCCCTGAACCTGGTCTGAGGAGGCCGCCATGACTGCTTATCTACGCCCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACG < 3:219421/146‑1 CGCCCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACGGGCGTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCG < 7:302134/105‑1 CGCCCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACGGGCGTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCG > 8:302134/1‑105 CCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACGGGCGTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTA > 5:42805/1‑149 CGGGCTGGGTGGCATTGTGGTGCCGTTTGCCGGGATCAAGCTGATCGACCTGCTGCTCAACGCCCTGAACCTGGTCTGAGGAGGCCGCCATGACTGCTTATCTACGCCCGGCATTGAGCCTGGCTTTGTTGATGACCCTGGTGACGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4701483‑4701334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgTAGATAAGCAGTCATGGCGGCCTCCTCAGACCAGGTTCAGGGCGTTGAGCAGCAGGTCGATCAGCTTGATCCCGGCAAACGGCACCACAATGCCACCCAGCCCGTA > NC_002947/4701380‑4701485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |