New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 474752467 (1.110)4 (0.070) 4/252 NT 5.7% coding (238/750 nt) etfB electron transfer flavoprotein subunit beta
?NC_002947 = 4747569 69 (1.200)coding (193/750 nt) etfB electron transfer flavoprotein subunit beta

ATCTGGCCGGTCTGGTTGTTGTCACTGTCGATGGCCTGCTTGCCGAGGATGACCAGCTGCGGCTGCTCCTTGTCGACAACGGCCTTCAGCGCCTTGGCCACGGCCAGGGAGTTCAGTTCGTCAGCGGCTTCTACCAGGATGGCACGGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4747373‑4747524
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcCCGACCACTGCCCAGGAGCAACTGCGTACTGCCCTGGCCCTGGGTGCCGACCGTGCCATCCTGGTAGAAGCCGCTGACGAACTGAACTCCCTGGCCGTGGCCAAGGCGCTGAAGGCCGTTGTCGACAAGGAGCAGCCGCAGCTG  <  NC_002947/4747569‑4747426
                                                                                                                                                                                                                                                                                                        
ATCTGGCCGGTCTGGTTGTTGTCACTGTCGATGGCCTGCTTGCCGAGGATGACCAGCTGCGGCTGCTCCTTGTCGACAACGGCCTTCAGCGCCTTGGCCACGGCCAGGGAGTTCAGTTCGTCAGCGGCTTCTACCAGGATGGCACGGTC                                                                                                                                                     <  1:276928/149‑1
                           TCGATGGCCTGCTTGCCGAGGATGACCAGCTGCGGCTGCTCCTTGTCGACAACGGCCTTCAGCGCCTTGGCCACGGCCAGGGAGTTCAGTTCGTCAGCGGCTTCTACCAGGATGGCACGGTCGGCCCGACCACTGCCCAGGAGCAACTG                                                                                                                          >  4:166800/1‑149
                                           CGAGGATGACCAGCTGCGGCTGCTCCTTGTCGACAACGGCCTTCAGCGCCTTGGCCACGGCCAGGGAGTTCAGTTCGTCAGCGGCTTCTACCAGGATGGCACGGTCGGCCCGACCACTGCCCAGGAGCAACTGCGTACTGCCCTGGCCC                                                                                                          >  5:285049/1‑149
                                              GGATGACCAGCTGCGGCTGCTCCTTGTCGACAACGGCCTTCAGCGCCTTGGCCACGGCCAGGGAGTTCAGTTCGTCAGCGGCTTCTACCAGGATGGCACGGTCGGCCCGACCACTGCCCAGGAGCAACTGCGTACTGCCCTGGCCCTGG                                                                                                       <  3:166800/149‑1
                                                           CGGCTGCTCCTTGTCGACAACGGCCTTCAGCGCCTTGGCCACGGCCAGGGAGTTCAGTTCGTCAGCGGCTTCTACCAGGATGGCACGGTCGGCCCGACCACTGCCCAGGAGCAACTGCGTACTGCCCTGGCCCTGGGTGCCGACCGTGC                                                                                          <  5:236815/149‑1
                                                                                                                                                  GTCGGCCCGACCACTGCCCAGGAGCAACTGCGTACTGCCCTGGCCCTGGGTGCCGACCGTGCCATCCTGGTAGAAGCCGCTGACGAACTGAACTCCCTGGCCGTGGCCAAGGCGCTGAAGGCCGTTGTCGACAAGGAGCAGCCGCAGCT   <  1:242857/149‑1
                                                                                                                                                   TCGGCCCGACCACTGCCCAGGAGCAACTGCGTACTGCCCTGGCCCTGGGTGCCGACCGTGCCATCCTGGTAGAAGCCGCTGACGAACTGAACTCCTTGGCCGTGGCCAAGGCGCTGAAGGCCGTTGTCGACAAGGAGCAGCCGCAGCTG  <  1:287781/149‑1
                                                                                                                                                                                                                                                                                                        
ATCTGGCCGGTCTGGTTGTTGTCACTGTCGATGGCCTGCTTGCCGAGGATGACCAGCTGCGGCTGCTCCTTGTCGACAACGGCCTTCAGCGCCTTGGCCACGGCCAGGGAGTTCAGTTCGTCAGCGGCTTCTACCAGGATGGCACGGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4747373‑4747524
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcCCGACCACTGCCCAGGAGCAACTGCGTACTGCCCTGGCCCTGGGTGCCGACCGTGCCATCCTGGTAGAAGCCGCTGACGAACTGAACTCCCTGGCCGTGGCCAAGGCGCTGAAGGCCGTTGTCGACAAGGAGCAGCCGCAGCTG  <  NC_002947/4747569‑4747426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.