New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4788966 = | 60 (1.000) | 3 (0.050) | 3/252 | NT | 5.3% | coding (4874/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
? | NC_002947 | 4789057 = | 51 (0.890) | coding (4783/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
CATCCATGAAGGCCAGGCCTGGAGCTATGCCGAACTCAACCGGCGCGCCAACCGCCTGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4789118‑4788966 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatGGGCCAGGCGGTTGGCGCGCCGGTTGAGTTCGGCATAGCTCCAGGCCTGGCCTTCATGGATGACAGCCACGGCATCCGGTGCGCGCAGCACTTGCGCTTCGAACTGGCGGGCCACGGCAGTATCGCTCAATTGCTCTGCAGGCCCCT > NC_002947/4789057‑4789203 CATCCATGAAGGCCAGGCCTGGAGCTATGCCGAACTCAACCGGCGCGCCAACCGCCTGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGG < 5:70308/149‑1 ATCCATGAAGGCCAGGCCTGGAGCTATGCCGAACTCAACCGGCGCGCCAACCGCCTGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGG < 1:314959/148‑1 CCATGAAGGCCAGGCCTGGAGCTATGCCGAACTCAACCGGCGCGCCAACCGCCTGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGA > 7:21337/1‑149 TCAACCGGCGCGCCAACCGCCTGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTG < 6:338306/113‑1 ATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGATGGGCAAGGCGGTTGGCGCGCCGGTTGAGTTCGGCATAGCTCCAGCCATGGCCTTCATG > 6:382278/1‑149 CCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGATGGGCCAGGCGGTTGGCGCGCCGGTTGAGTTCGG < 7:129358/120‑1 CCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGATGGGCCAGGCGGTTGGCGCGCCGGTTGAGTTCGG > 8:129358/1‑120 GCGATGGGCCAGGCGGTTGGCGCGCCGGTTGAGTTCGGCATAGCTCCAGGCCTGGCCTTCATGGATGACAGCCACGGCATCCGGTGCGCGCAGCACTTGCGCTTCGAACTGGCGGGCCACGGCAGTATCGCTCAATTGCTCTGCAGGCC > 2:333086/1‑149 ATGGGCCAGGCGGTTGGCGCGCCGGTTGAGTTCGGCATAGCTCCAGGCCTGGCCTTCATGGATGACAGCCACGGCATCCGGTGCGCGCAGCACTTGCGCTTCGAACTGGCGGGCCACGGCAGTATCGCTCAATTGCTCTGCAGGCCCCT < 6:376207/149‑1 CATCCATGAAGGCCAGGCCTGGAGCTATGCCGAACTCAACCGGCGCGCCAACCGCCTGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4789118‑4788966 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatGGGCCAGGCGGTTGGCGCGCCGGTTGAGTTCGGCATAGCTCCAGGCCTGGCCTTCATGGATGACAGCCACGGCATCCGGTGCGCGCAGCACTTGCGCTTCGAACTGGCGGGCCACGGCAGTATCGCTCAATTGCTCTGCAGGCCCCT > NC_002947/4789057‑4789203 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |