New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4814531 = | 60 (1.000) | 5 (0.090) | 5/248 | NT | 9.0% | coding (99/1203 nt) | PP_4240 | microcin B17 processing protein McbD |
? | NC_002947 | 4814567 = | 45 (0.800) | coding (135/1203 nt) | PP_4240 | microcin B17 processing protein McbD |
GGCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4814685‑4814531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggctgGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCTCAAAC > NC_002947/4814567‑4814713 GGCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAG > 8:198624/1‑149 GCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGC > 4:182265/1‑149 ACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGG < 8:187055/149‑1 CTCTTCAGTGGTCAGCCCGTCACCTTGTCTGCACGTGTCATGCAGAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGC > 2:47023/1‑149 TTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGG > 1:270459/1‑149 GACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCA > 3:304499/1‑149 ACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTG > 1:304827/1‑148 CAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGCCATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGCCCACTG > 2:176338/1‑146 AACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATT < 2:270459/149‑1 CGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCAT < 4:304499/149‑1 GCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTGTAGTTGGACATCCCTGTGCAGGACACGTGCAGACGAGGTGACGGGCTGACGACTGAAGAGTGCCAAGCATTCACGAAGGCGTTTTCT > 4:307808/1‑149 GGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCGAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCTCA < 4:216018/149‑1 CTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTTGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCTCAAA < 5:280209/149‑1 TGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCTCAAAC > 2:246535/1‑149 GGCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4814685‑4814531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggctgGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCTCAAAC > NC_002947/4814567‑4814713 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |