| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4995646 = | 57 (0.950) | 5 (0.090) | 4/254 | NT | 8.6% | coding (36/1380 nt) | lpdV | branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase |
| ? | NC_002947 | 4995687 = | 52 (0.900) | coding (77/1380 nt) | lpdV | branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase | |||||
GAAACTGCTCGGCCACGTGGATCAGCGCCTTGGACGGGATGCAGCCGATGTTCAGGCAGGTGCCGCCCAGTGCCTGGCCTTCCACCAGTACGGTAGGAATGCCCAGTTGCCCGGCGCGGATGGCTGCTACATAGCCGCCAGGGCCGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4995797‑4995646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCGTCCAAGGCGCTGATCCACGTGGCCGAGCAGTTTCACCAGGCCTCGCGCTTTACCGAACCCTCGCCGCTGG > NC_002947/4995687‑4995833 GAAACTGCTCGGCCACGTGGATCAGCGCCTTGGACGGGATGCAGCCGATGTTCAGGCAGGTGCCGCCCAGTGCCTGGCCTTCCACCAGTACGGTAGGAATGCCCAGTTGCCCGGCGCGGATGGCTGCTACATAGCCGCCAGGGCCGCCG > 1:291612/1‑149 ACTGCTCGGCCACGTGGATCAGCGCCTTGGACGGGATGCAGCCGATGTTCAGGCAGGTGCCGCCCAGTGCCTGGCCTTCCACCAGTACGGTAGGAATGCCCAGTTGCCCGGCGCGGATGGCTGCTACATAGCCGCCAGGGCCGCCGCC > 7:74428/1‑148 CAGTTGCCCGGCGCGGATGGCTGCTACATAGCCGCCA‑‑‑‑‑‑‑‑‑‑‑GGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCGTCCAAGGCGCTGATCCACGTGGCCGAGCAGTTT > 8:63870/1‑148 CCCGGCGCGGATGGCTGCTACATAGCCGCCAGGGCCGCCGCCGGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCGTCCAAGGCG < 1:303365/129‑1 CCCGGCGCGGATGGCTGCTACATAGCCGCCAGGGCCGCCGCCGGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCGTCCAAGGCG > 2:303365/1‑129 CCGGCGCGGATGGCTGCTACATAGCCGCCAGGGCCGCCGCCGGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCGTCCAAGGCGCTGATCCACGTGGCCGAGCAG > 4:229545/1‑149 CCGGCGCGGATGGCTGCTACATAGCCGCCAGG‑‑‑GCCGCCGGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCGTCCAAGGCGCTGATCCACGTGGCCGAGCAGTTT > 3:114995/1‑149 CGGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCGGCATCCCGTCCAAGGCGCTGATCCACGTGGCCGAGCAGTTTCACCAGGCCTCGCGCTTTACCGAACCCTCGCCGCTGG < 2:209521/149‑1 GAAACTGCTCGGCCACGTGGATCAGCGCCTTGGACGGGATGCAGCCGATGTTCAGGCAGGTGCCGCCCAGTGCCTGGCCTTCCACCAGTACGGTAGGAATGCCCAGTTGCCCGGCGCGGATGGCTGCTACATAGCCGCCAGGGCCGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4995797‑4995646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGGCAACTGGGCATTCCTACCGTACTGGTGGAAGGCCAGGCACTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCGTCCAAGGCGCTGATCCACGTGGCCGAGCAGTTTCACCAGGCCTCGCGCTTTACCGAACCCTCGCCGCTGG > NC_002947/4995687‑4995833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |