| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5090492 = | 85 (1.410) | 5 (0.090) | 4/250 | NT | 6.1% | coding (445/1020 nt) | astA‑II | arginine N‑succinyltransferase subunit alpha |
| ? | NC_002947 | 5090540 = | 73 (1.280) | coding (397/1020 nt) | astA‑II | arginine N‑succinyltransferase subunit alpha | |||||
CTCACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5090643‑5090492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgttcaCCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAATGTTTCGTTACGAAAACTGTAGAACGGCTCGGA > NC_002947/5090540‑5090687 CTCACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGT > 2:63002/1‑149CTCACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGT < 6:64091/149‑1CTCACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGT > 7:146022/1‑149 ACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCA > 1:156759/1‑149 ACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCA < 2:156759/149‑1 ACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCA < 7:320020/149‑1 ACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTC < 1:63002/148‑1 ACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTC < 7:261231/148‑1 TGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCG > 5:263928/1‑149 TGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCG > 1:13638/1‑149 GAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGAT < 1:28567/123‑1 GAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGAT > 2:28567/1‑123 CCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAAT < 6:263928/149‑1 CTGATCACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAATGTTTCGTTACGAAAACTGTAGAACGG < 8:73267/149‑1 ACCAGCTCCGGCGCCACATAGAAACTGGTCATCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAATGTTTCGTTACGAAAACTGTAGAACGGCTCGGA < 5:354088/149‑1 ACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAATGTTTCGTTACGAAAACTGTAGAACGGCTCGGA < 6:16395/149‑1 ACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAATGTTTCGTTACGAAAACTGTAGAACGGCTCGGA < 8:254080/149‑1 ACCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAATGTTTCGTTACGAAAACTGTAGAACGGCTCG > 7:254080/1‑147 CTCACGCGAGCTGAAGATACACAACAAGATCCATGTGCTGTCGCTGTGTCACGATCTGACCGGCAACAGCCTGCTGACCAGTTTCTATGTGGCGCCGGAGCTGGTGAACAGTGGCTGGGCCGAGCTCAACTCGCGCGGCCGGCTGCTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5090643‑5090492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgttcaCCAGCTCCGGCGCCACATAGAAACTGGTCAGCAGGCTGTTGCCGGTCAGATCGTGACACAGCGACAGCACATGGATCTTGTTGTGTATCTTCAGCTCGCGTGAGGCGTGCACGAATGTTTCGTTACGAAAACTGTAGAACGGCTCGGA > NC_002947/5090540‑5090687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |