| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5299515 = | 64 (1.060) | 6 (0.100) | 6/258 | NT | 8.0% | coding (587/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| ? | NC_002947 | 5299614 = | 76 (1.290) | coding (488/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease | |||||
CTTGTACGCAGTGGCGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCA‑‑‑ACTGTTCGAGGGCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5299663‑5299515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTGAAGCCAGGCATTTAAGTCAAGGTTGGCCAGCAGTT > NC_002947/5299614‑5299761 CTTGTACGCAGTGGCGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCA‑‑‑ACTGTTCGAGGGCGGCGC < 3:341806/149‑1 GCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCA‑‑‑ACTGTTCGAGGGCGGCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAG > 8:223016/1‑149 ATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCA‑‑‑ACTGTTCGAGGGCGGCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGC > 5:52080/1‑149 GCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCAGGGCCTGGTCGA‑TGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGT > 1:59381/1‑119 GCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCAGGGCCTGGTCGA‑TGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGT < 2:59381/119‑1 GGACCTGCCAGAGCGTCTGGCGCA‑‑‑ACTGTTCGAGGGCGGCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGAT < 6:52080/149‑1 CCAGAGCGTCTGGCGCA‑‑‑ACTGTTCGAGGGCGGCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTG < 7:223016/148‑1 CTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTGAAGCCAGGCATTTAAGTCAAGGTTGGCCAGCAGTT < 7:326915/149‑1 CTTGTACGCAGTGGCGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCA‑‑‑ACTGTTCGAGGGCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5299663‑5299515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTGAAGCCAGGCATTTAAGTCAAGGTTGGCCAGCAGTT > NC_002947/5299614‑5299761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |