New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5576660	67 (1.110)	7 (0.120)	7/252	NT	10.2%	coding (382/1536 nt)	PP_4906	hypothetical protein
	?	NC_002947	= 5576694	59 (1.030)					coding (416/1536 nt)	PP_4906	hypothetical protein

GCCGAACCCGCCGAAAGCCTGGAGGTTGCTCTCAACCGCCTGGGCCTGGAGCGCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5576510‑5576660 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagcCGTGCCAGGCGGCTGGCGAACAGTCCGCTGGCTTGCTGTGCCGCATGCTGGCTGATCATCTGGAACTGGCACAGTACCGGCGGAATTTCCTCCACGGGCAGCGCCGGCAGGCGTTTGAGAAGCTGCTCGCTGCGCTCCAGGCC  <  NC_002947/5576694‑5576552                                                                                                                                                                                                                                                                                                        GCCGAACCCGCCGAAAGCCTGGAGGTAGCTCTCAACCGCCTGGGCCTGGAGCGCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCA                                                                                                                                                     >  1:204243/1‑147                              TCTCAACCGCCTGGGCCTGGAGCGCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCACAGCCGTGCCAGGCGGCTGGCGAACAGTCCG                                                                                                                      >  7:91015/1‑149                                  AACCGCCTGGGCCTGGAGCGCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCACAGCCGTGCCAGGCGGCTGGCGAACAGTCCGCTGG                                                                                                                  >  4:104614/1‑149                                    CCGCCTGGGCCTGGAGCGCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCACAG‑CAAGCCAGGCGGCTGGCGAACAGTCCGCTGGCTT                                                                                                               <  6:128006/149‑1                                            GCCTGGAGCGCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCACAGCCGTGCCAGGCGGCTGGCGAACAGTCCGCTGGCTTGCTGTGC                                                                                                        <  8:91015/149‑1                                                     GCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCACAGCCGTGCCAGGCGGCTGGCGAACAGTCCGCTGGCTTGCTGTGCCGCATGCTG                                                                                               <  3:104614/149‑1                                                                CTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGCCACAGCCGTGCCAGGCGGCTGGCGAACAGTCCGCTGGCTTGCTGTGCC                                                                                                       >  3:262440/1‑130                                                                CTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGCCACAGCCGTGCCAGGCGGCTGGCGAACAGTCCGCTGGCTTGCTGTGCC                                                                                                       <  4:262440/130‑1                                                                                                                                                  CACAGCCGTGCCAGGCGGCTGGCGAACAGTCCGCTGGCTTGCTGTGCCGCATGCTGGCTGATCATCTGGCACTGGCACAGTACCGGCGGAATTTCCTCCCCGGGCAGCGCCGGCAGGCGTTTGAGAAGCTGCTCGCTGCGCTCCAGGCC  >  1:79623/1‑149                                                                                                                                                                                                                                                                                                        GCCGAACCCGCCGAAAGCCTGGAGGTTGCTCTCAACCGCCTGGGCCTGGAGCGCAGCGAGCAGCTTCTCAAACGCCTGCCGGCGCTGCCCGTGGAGGAAATTCCGCCGGTACTGTGCCAGTTCCAGATGATCAGCCAGCATGCGGCACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5576510‑5576660 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagcCGTGCCAGGCGGCTGGCGAACAGTCCGCTGGCTTGCTGTGCCGCATGCTGGCTGATCATCTGGAACTGGCACAGTACCGGCGGAATTTCCTCCACGGGCAGCGCCGGCAGGCGTTTGAGAAGCTGCTCGCTGCGCTCCAGGCC  <  NC_002947/5576694‑5576552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.