| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5681718 = | 61 (1.010) | 5 (0.090) | 4/256 | NT | 8.0% | coding (242/474 nt) | PP_4987 | putative Chemotaxis protein |
| ? | NC_002947 | 5681763 = | 56 (0.960) | coding (197/474 nt) | PP_4987 | putative Chemotaxis protein | |||||
GTGGCCGAGTTGAGCGGGCAGCGTAACCTGGTGTGCCAGCATGGCGACCCCGCCTGGCACCTGGGGTGGATCGACTGGCGTCAGCAACGCCTGCCGTTGATCGGTTTCGAGGCCGCGTGCGGTGGTGAGACGCCGTGCGGCGAGCGGGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5681869‑5681718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCAGCGTGCGGTCGCCCAACGGCA > NC_002947/5681763‑5681910 GTGGCCGAGTTGAGCGGGCAGCGTAACCTGGTGTGCCAGCATGGCGACCCCGCCTGGCACCTGGGGTGGATCGACTGGCGTCAGCAACGCCTGCCGTTGATCGGTTTCGAGGCCGCGTGCGGTGGTGAGACGCCGTGCGGCGAGCGGGC < 4:346362/149‑1 GTTTCGAGGCCGCGTGCGGTGGTGAGACGCCGTGCGGCGAGCGGGCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACT > 4:360177/1‑149 TTTCGAGGCCGCGTGCGGTGGTGAGACGCCGTGCGGCGAGCGGGCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTC > 6:346450/1‑149 AGGCCGCGTGCGGTGGTGAGACGCCGTGCGGCGAGCGGGCTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCA > 8:306386/1‑149 GCCGCGTGCGGTGGTGAGACGCCGTGCGGC‑‑‑‑‑‑‑NTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCCGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGT > 1:31021/1‑149 GCCGCGTGCGGTGGTGAGACGCCGTGCGGC‑‑‑‑‑‑‑CTCGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGT > 1:25261/1‑149 CGAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCACCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCAGCGTGCGGTCGCCCAACGGC < 6:24374/149‑1 GAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCAGCGTGCGGTCGCCCAACGGCA > 3:164499/1‑149 GAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGCGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCAGCGTGCGGTCGCCCAACGGCA < 6:311572/149‑1 GTGGCCGAGTTGAGCGGGCAGCGTAACCTGGTGTGCCAGCATGGCGACCCCGCCTGGCACCTGGGGTGGATCGACTGGCGTCAGCAACGCCTGCCGTTGATCGGTTTCGAGGCCGCGTGCGGTGGTGAGACGCCGTGCGGCGAGCGGGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5681869‑5681718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgAAACCGATCAACGGCAGGCGTTGCTGACGCCAGTCGATCCACCCCAGGTGCCAGGCGGGGTCGCCATGCTGGCACACCAGGTTACGCTGCCCGCTCAACTCGGCCACCGCCACGTTGGGCAACACCAGCGTGCGGTCGCCCAACGGCA > NC_002947/5681763‑5681910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |