New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5721802 =	56 (0.930)	4 (0.070)	3/246	NT	6.5%	coding (462/735 nt)	glnQ	glutamine transport ATP‑binding protein GlnQ
	?	NC_002947	5721905 =	63 (1.120)					coding (359/735 nt)	glnQ	glutamine transport ATP‑binding protein GlnQ

GCCTGGCGCAGAAGGTGGTGCGCAAGCGCAACAAGGCTGACCGCGAAGCCAAGGCCCGGGCGTTGCTGGAGAAGGTGGGTATTTCGCAGAAGGCCAACGAGTACCCGTCG‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5721956‑5721802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgggccTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAGTCATGTGCGGAAACAGGTTGAAGTGCTGGAACACCATGCCGACTTCGCGGCGGTAGGCATTGATGTCGGTCTTGGGGT  >  NC_002947/5721905‑5722052                                                                                                                                                                                                                                                                                                                  GCCTGGCGCAGAAGGTGGTGCGCAAGCGCAACAAGGCTGACCGCGAAGCCAAGGCCCGGGCGTTGCTGGAGAAGGTGGGTATTTCGCAGAAGGCCAACGAGTACCCGTCG‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCC                                                                                                                                                            >  4:302746/1‑149   CTGGCGCAGAAGGTGGTGCGCAAGCGCAACAAGGCTGACCGCGAAGCCAAGGCCCGGGCGTTGCTGGAGAAGGTGGGTATTTCGCAGAAGGCCAACGAGTACCCGTCG‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCG                                                                                                                                                          >  8:36559/1‑149      GCGCAGAAGGTGGTGCGCAAGCGCAACAAGGCTGACCGCGAAGCCAAGGCCCGGGCGTTGCTGGAGAAGGTGGGTATTTCGCAGAAGGCCAACGAGTACCCGTCG‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCGGGC                                                                                                                                                       <  2:192233/149‑1                                                      GCCCGGGCGTTGCTGGAGAAGGTGGGTATTTCGCAGAAGGCCAACGAGTACCCGTCGAGGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCGGGCCTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCG                                                                                                        >  1:104600/1‑149                                                      GCCCGGGCGTTGCTGGAGAAGGTGGGTATTTCGCAGAAGGCCAACGAGTACCCGTCG‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCGGGCCTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGC                                                                                                       >  6:8721/1‑149                                                                                                     GTACCCGTCG‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCGGGCCTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAGTCATGTGCGGAAACAGGTTGAAGT                                                        <  2:104600/149‑1                                                                                                              G‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCGGGCCTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAGTCATGTGCGGAAACAGGTTGAAGTGCTGGAAC                                                <  5:8721/148‑1                                                                                                                                                    GCCCGGGCCTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAGTCATGTGCGGAAACAGGTTGAAGTGCTGGAACACCATGCCGACTTCGCGGCGGTAGGCATTGATGTCGGT          <  1:271678/149‑1                                                                                                                                                      CCGGGCCTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAG                                                                                >  1:330001/1‑77                                                                                                                                                      CCGGGCCTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAG                                                                                <  2:330001/77‑1                                                                                                                                                            CTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAGTCATGTGCGGAAACAGGTTGAAGTGCTGGAACACCATGCCGACTTCGCGGCGGTAGGCATTGAGGTCGGTCTTGGGGT  >  4:105114/1‑149                                                                                                                                                            CTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAGTCATGTGCGGAAACAGGATGAAGTCCTGGAACACCATGCCGCGATCGCGGCGGAAGGCATTGATGTCGGTCTTGGGGT  >  8:334188/1‑149                                                                                                                                                                                                                                                                                                                  GCCTGGCGCAGAAGGTGGTGCGCAAGCGCAACAAGGCTGACCGCGAAGCCAAGGCCCGGGCGTTGCTGGAGAAGGTGGGTATTTCGCAGAAGGCCAACGAGTACCCGTCG‑CGCTTGTCTGGCGGCCAGCAACAGCGGGTGGCGATTGCCCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5721956‑5721802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgggccTTGGCTTCGCGGTCAGCCTTGTTGCGCTTGCGCACCACCTTCTGCGCCAGGCACAGGTTTTCCAGCACAGTCATGTGCGGAAACAGGTTGAAGTGCTGGAACACCATGCCGACTTCGCGGCGGTAGGCATTGATGTCGGTCTTGGGGT  >  NC_002947/5721905‑5722052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.