| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5750197 = | 66 (1.100) | 4 (0.070) | 3/246 | NT | 6.8% | coding (1366/1455 nt) | thiI | tRNA sulfurtransferase |
| ? | NC_002947 | 5750242 = | 48 (0.860) | coding (1321/1455 nt) | thiI | tRNA sulfurtransferase | |||||
CTGCCAGGCCAGATCGTCATCGACATTCGCCACCCCGATGCCCAGGAAGACGAACCTCTGGTGCTGGAAGGTATCGAAGTCCAGGCCATGCCGTTCTACGCCATCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5750347‑5750197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttgctgtTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCTGGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGC > NC_002947/5750242‑5750387 CTGCCAGGCCAGATCGTCATCGACATTCGCCACCCCGATGCCCAGGAAGACGAACCTCTGGTGCTGGAAGGTATCGAAGTCCAGGCCATGCCGTTCTACGCCATCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCT < 3:255551/149‑1CTGCCAGGCCAGATCGTCATCGACATTCGCCACCCCGATGCCCAGGAAGACGAACCTCTGGTGCTGGAAGGTATCGAAGTCCAGGCCATGCCGTTCTACGCCATCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCT > 5:235872/1‑149 GGCCAGATCGTCATCGACATTCGCCACCCCGATGCCCAGGAAGACGAACCTCTGGTGCTGGAAGGTATCGAAGTCCAGGCCATGCCGTTCTACGCCATCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTAC < 1:365588/138‑1 TCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT > 3:159232/1‑149 TCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGT < 3:17314/132‑1 TCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGT > 4:17314/1‑132 CAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCTG > 8:281692/1‑149 GCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCTGGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCC > 5:277931/1‑147 TTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGGGGCGAATGTCGATGACGATCTGGCCTGGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGC < 5:23598/147‑1 CTGCCAGGCCAGATCGTCATCGACATTCGCCACCCCGATGCCCAGGAAGACGAACCTCTGGTGCTGGAAGGTATCGAAGTCCAGGCCATGCCGTTCTACGCCATCAACAGCAAGTTCAAGCACCTGGACCCCACGCGCCAGTACTTGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5750347‑5750197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttgctgtTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCTGGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGC > NC_002947/5750242‑5750387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |