New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5755252	61 (1.010)	4 (0.070)	4/256	NT	6.6%	coding (366/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
	?	NC_002947	= 5755276	54 (0.920)					coding (390/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG

CAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCAAGCGCGCCAACCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5755103‑5755252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacATCCAGGCCTTGCTGCTCCTGGGCGTGCTGGTTGGCGCGCTTGACCAGCGATACCGCTTCGTCGACGTCGAATGGCTTGGGCAGGTACTCGAAGGCACCGCCTTGGTACGAGGCCACGGCGCTGTCCAGGTCGGAGTGGGCGGT  <  NC_002947/5755276‑5755133                                                                                                                                                                                                                                                                                                        CAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCAAGCGCGCCAACCAGCA                                                                                                                                                   >  4:53781/1‑149  AGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCCAGCGCGCCAACCCGCAC                                                                                                                                                  >  7:327106/1‑149                                    CCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCAAGCGCGCCAACCAGCACATCCAGGCCTTGCTGCTCCTGGGCGTGCTGGTTG                                                                                                                <  3:53781/149‑1                                          CGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCAAGCGCGCCAACCAGCACATCCAGGCCTTGCTGCTCCTGGGCGTGCTGGTTGGCGC                                                                                                            <  6:335215/147‑1                                                               CTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCAAGCGCGCCAACCAGCACATCCAGGCCTTGCTGCTCCTGGGCGTGCTGG                                                                                                                   <  5:90242/119‑1                                                               CTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCAAGCGCGCCAACCAGCACATCCAGGCCTTGCTGCTCCTGGGCGTGCTGG                                                                                                                   >  6:90242/1‑119                                                                                                                                                   GCACATCCAGGCCTTGCTGCTCCTGGGCGTGCTGGTTGGCGCGCTTGACCAGCGATACCGCTTCGTCGACGTCGAATGGCTTGGGCAGGTACTCGAAGGCACCGCCTTGGTACGAGGCCACGGCGCTGTCCAGGTCGGAGTGGGCGGT  >  8:15318/1‑148                                                                                                                                                                                                                                                                                                        CAGCACCCGCGCCTGCCGGTCATCATCATGACCGCCCACTCCGACCTGGACAGCGCCGTGGCCTCGTACCAAGGCGGTGCCTTCGAGTACCTGCCCAAGCCATTCGACGTCGACGAAGCGGTATCGCTGGTCAAGCGCGCCAACCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5755103‑5755252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacATCCAGGCCTTGCTGCTCCTGGGCGTGCTGGTTGGCGCGCTTGACCAGCGATACCGCTTCGTCGACGTCGAATGGCTTGGGCAGGTACTCGAAGGCACCGCCTTGGTACGAGGCCACGGCGCTGTCCAGGTCGGAGTGGGCGGT  <  NC_002947/5755276‑5755133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.