| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5795359 = | 60 (1.000) | 5 (0.080) | 4/258 | NT | 7.0% | coding (2541/4446 nt) | gltB | L‑glutamate synthase subunit alpha |
| ? | NC_002947 | 5795410 = | 74 (1.260) | coding (2490/4446 nt) | gltB | L‑glutamate synthase subunit alpha | |||||
GTGGTCAACACCCTGCAAGCGGCTGTGCAGCAGGGCGACTACGCCAAGTTCAAGGAATACACCACGCTGGTGGACCAGCGCCCGGTGTCGATGATTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5795508‑5795359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAG > NC_002947/5795410‑5795553 GTGGTCAACACCCTGCAAGCGGCTGTGCAGCAGGGCGACTACGCCAAGTTCAAGGAATACACCACGCTGGTGGACCAGCGCCCGGTGTCGATGATTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGT < 1:30250/149‑1 TGGTCAACACCCTGCAAGCGGCTGTGCAGCAGGGCGACTACGCCAAGTTCAAGGAATACACCACGCTGGTGGACCAGCGCCCGGTGTCGATGATTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTC < 5:157537/149‑1 TGGTCAACACCCTGCAAGCGGCTGTGCAGCAGGGCGACTACGCCAAGTTCAAGGAATACACCACGCTGGTGGACCAGCGCCCGGTGTCGATGATTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTC < 5:292802/149‑1 GTCAACACCCTGCAAGCGGCTGTGCAGCAGGGCGACTACGCCAAGTTCAAGGAATACACCACGCTGGTGGACCAGCGCCCGGTGTCGATGATTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTC > 2:166983/1‑147 ATGATTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGG > 3:101289/1‑149 TTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTT > 8:204472/1‑149 GTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGAC > 3:210133/1‑149 GTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGAC > 3:359809/1‑149 GCCGACCAGCCGCTGGCGCTGGAGCAGGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGT < 4:101289/149‑1 GTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAG > 8:92120/1‑147 TCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGG < 6:237518/135‑1 GTGGTCAACACCCTGCAAGCGGCTGTGCAGCAGGGCGACTACGCCAAGTTCAAGGAATACACCACGCTGGTGGACCAGCGCCCGGTGTCGATGATTCGTGACTTGCTCAAGGTGAAAGTGGCCGACCAGCCGCTGGCGCTGGAGCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5795508‑5795359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAG > NC_002947/5795410‑5795553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |