New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5936201 | 67 (1.110) | 3 (0.050) | 3/252 | NT | 4.5% | coding (263/450 nt) | PP_5205 | hypothetical protein |
? | NC_002947 | = 5936232 | 62 (1.080) | coding (294/450 nt) | PP_5205 | hypothetical protein | |||||
Rejected: Frequency below/above cutoff threshold. |
CGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5936053‑5936201 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccacATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGGTA < NC_002947/5936232‑5936086 CGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCAC < 7:332455/149‑1 CAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGG < 8:106284/149‑1 AGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTT < 7:116115/146‑1 AGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTT > 8:116115/1‑146 GCCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTG < 5:302625/149‑1 GCCACATCCACCGAGCTCCACTGGTTCTTGTCGGTCGTGGCCTTAGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTG < 3:253145/149‑1 CCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGG < 5:194375/149‑1 ACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGTCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGGTA < 3:80343/149‑1 ACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGG > 8:278611/1‑147 CGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5936053‑5936201 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccacATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGGTA < NC_002947/5936232‑5936086 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |