| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5976547 = | 78 (1.300) | 4 (0.070) | 4/248 | NT | 5.5% | coding (348/1491 nt) | yifB | ATP‑dependent chelatase |
| ? | NC_002947 | 5976606 = | 64 (1.130) | coding (407/1491 nt) | yifB | ATP‑dependent chelatase | |||||
TTCAGGTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5976702‑5976547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcgcTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCTGCA > NC_002947/5976606‑5976750 TTCAGGTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCAC > 3:326986/1‑149 AGGTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGG > 1:50495/1‑149 GTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGC > 3:322530/1‑149 AGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGACAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCC > 6:307631/1‑149 GCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCC > 1:169981/1‑149 CCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGA > 1:64270/1‑134 CCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGA < 2:64270/134‑1 GCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGCTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCTGCA < 2:184856/149‑1 GCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCTG < 1:267122/145‑1 GCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCTG > 2:267122/1‑145 CTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGC < 1:260454/118‑1 CTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGC > 2:260454/1‑118 TTCAGGTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5976702‑5976547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcgcTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCTGCA > NC_002947/5976606‑5976750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |