New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6094850 | 59 (0.980) | 3 (0.050) | 3/256 | NT | 4.5% | coding (421/1809 nt) | pycB | pyruvate carboxylase subunit B |
? | NC_002947 | = 6094892 | 70 (1.200) | coding (379/1809 nt) | pycB | pyruvate carboxylase subunit B | |||||
Rejected: Frequency below/above cutoff threshold. |
ACCAGCTCGCCAGTGGCGAACGGGGTCAGCAGGCCGGCCATGTCCTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6094702‑6094850 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGCGACTCGGTGGCGA < NC_002947/6094892‑6094751 ACCAGCTCGCCAGTGGCGAACGGGGTCAGCAGGCCGGCCATGTCCTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTG > 1:262384/1‑149 CTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCC > 6:91893/1‑147 GATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAG < 5:91893/147‑1 GATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTAGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGG < 2:122638/148‑1 CTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGAGACACGGTGGCGA > 1:139148/1‑145 CTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGAGACACGGTGGCGA < 2:139148/145‑1 ACCAGCTCGCCAGTGGCGAACGGGGTCAGCAGGCCGGCCATGTCCTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6094702‑6094850 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGCGACTCGGTGGCGA < NC_002947/6094892‑6094751 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |