New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 609485059 (0.980)3 (0.050) 3/256 NT 4.5% coding (421/1809 nt) pycB pyruvate carboxylase subunit B
?NC_002947 = 6094892 70 (1.200)coding (379/1809 nt) pycB pyruvate carboxylase subunit B
Rejected: Frequency below/above cutoff threshold.

ACCAGCTCGCCAGTGGCGAACGGGGTCAGCAGGCCGGCCATGTCCTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6094702‑6094850
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGCGACTCGGTGGCGA  <  NC_002947/6094892‑6094751
                                                                                                                                                                                                                                                                                                   
ACCAGCTCGCCAGTGGCGAACGGGGTCAGCAGGCCGGCCATGTCCTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTG                                                                                                                                                >  1:262384/1‑149
                                            CTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCC                                                                                                      >  6:91893/1‑147
                                               GATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAG                                                                                                   <  5:91893/147‑1
                                               GATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTAGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGG                                                                                                  <  2:122638/148‑1
                                                                                                                                                  CTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGAGACACGGTGGCGA  >  1:139148/1‑145
                                                                                                                                                  CTGCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGAGACACGGTGGCGA  <  2:139148/145‑1
                                                                                                                                                                                                                                                                                                   
ACCAGCTCGCCAGTGGCGAACGGGGTCAGCAGGCCGGCCATGTCCTTGATCGCCACCGAGTCGCAACCCATGGCTTCCATCTGCTTGGCCTGGTTCACGAAGGCTTCGATGGTGTGTACCGGGCTGGTGGTGTAAGCGATGGTGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6094702‑6094850
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgCGCGTGGCCATCGAAGCGGTCAAGGCCGCCGGCAAGCACGCCCAGGGCACCATCGCTTACACCACCAGCCCGGTACACACCATCGAAGCCTTCGTGAACCAGGCCAAGCAGATGGAAGCCATGGGTTGCGACTCGGTGGCGA  <  NC_002947/6094892‑6094751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.