New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1867976 | 50 (0.830) | 3 (0.050) | 3/250 | NT | 6.6% | coding (90/1296 nt) | cobB | cobyrinate a,c‑diamide synthase |
? | NC_002947 | = 1868016 | 38 (0.670) | coding (130/1296 nt) | cobB | cobyrinate a,c‑diamide synthase |
ATGGGCATGCTCAAGCACGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTCTGC > NC_002947/1867828‑1868121 | ctgGGCATGCTCAAGCACGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGC < 2:342023‑M1/148‑1 (MQ=255) gCATGCTCAAGCACGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTg > 6:377495/1‑148 (MQ=255) aTGCTCAAGCACGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCAc < 2:309622/149‑1 (MQ=255) tGCTCAAGCACGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCAcc < 7:134145/149‑1 (MQ=255) tCAAGCACGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTAGATCTCGGAGCACGCCTAATCAAAAAAAAAAACTACATTCACTGCTGCGCTGGCCCGCCTGCAcccc > 2:367348/1‑146 (MQ=255) cGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCt > 5:72304/1‑146 (MQ=255) cGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCt < 6:72304/146‑1 (MQ=255) ccTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGgc < 5:377495/149‑1 (MQ=255) cTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGgcg > 1:99790/1‑149 (MQ=255) aGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGCGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAgg > 2:163277/1‑149 (MQ=255) gCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTg > 4:136183/1‑149 (MQ=255) tGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGACGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAACACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGcc > 7:80425/1‑148 (MQ=255) gTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCgg < 5:41351/148‑1 (MQ=255) gTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCgg < 3:138963/148‑1 (MQ=255) cgcgCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGtt < 2:99790/148‑1 (MQ=255) cgcgCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCACAACCTCGGGCGCAAGGTGCGGGTGtt < 1:16881/148‑1 (MQ=255) gcgcACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGAAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTc > 6:351289/1‑148 (MQ=255) cacaGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAAt > 5:55369/1‑149 (MQ=255) cacaGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAAt < 2:379840/149‑1 (MQ=255) aGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATgcgggcc > 3:114591‑M2/1‑142 (MQ=255) ggCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCatttgaacacccgcaccttgcgcccgaggttgcggtgcaggcgggcca < 3:244520‑M1/149‑49 (MQ=255) gCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCatttgaacacccgcaccttgcgcgcgaggttgcggtgcaggcgggccag < 4:236052‑M1/149‑50 (MQ=255) gCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGAGCCGGCCTCTTGAAAGGACAAGACTACAGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGTGTGTTCAAATGCGGGccc > 6:209951/1‑148 (MQ=255) gTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCatttgaacacccgcaccttgcgcccgaggttgcggtgcaggcgggccagcg < 8:280575‑M1/149‑52 (MQ=255) aaCTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTc < 3:17389/149‑1 (MQ=255) tgAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGAc > 5:181420/1‑149 (MQ=255) cGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCgat < 3:136183/149‑1 (MQ=255) gcCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATtctc < 2:363514/149‑1 (MQ=255) ttGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGgcgc > 7:201988/1‑149 (MQ=255) gATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGgcgcgc > 8:44487/1‑149 (MQ=255) tCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCga < 4:257914/120‑1 (MQ=255) tCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCga > 3:257914/1‑120 (MQ=255) cgctGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCg < 4:11037/148‑1 (MQ=255) gcggcgCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGgt < 1:134691/149‑1 (MQ=255) gcCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTAt > 6:92981/1‑148 (MQ=255) ctctGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCt > 2:55619/1‑147 (MQ=255) ctctGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCt < 1:55619/147‑1 (MQ=255) gCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCCACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGGCCCGATGAGTCTCGCCCGGGCCAGTGGCGCGCCGGTGGCGCAGCTGGAccgg > 2:158365/1‑147 (MQ=255) gCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGgt < 4:260294/133‑1 (MQ=255) gCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGgt > 3:260294/1‑133 (MQ=255) ccAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCtgt > 3:297385/1‑149 (MQ=255) aaGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCCCAACCTCGGGCCCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGTTGTATCAGATGTAACTGAGgatgat > 6:1439/1‑149 (MQ=255) aGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATc < 2:380023/149‑1 (MQ=255) cTACCGTCACTGCTGCGCTGGCCCGCCTGCACCTCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGACGGTGTATCAGCTGGACCTGTGGATGATCGGt < 5:209951/149‑1 (MQ=255) cTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCATGGTGCGGGTGTTCAAATGCGGGCCCGAGTTTCTTGACCCGATGTTTCTCGAAGGGGCCAGTGGCGCGGCGGTGTATCAGGTGGACCTGTGGATGATCgg < 8:80425/148‑1 (MQ=255) tACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGt < 5:35992/51‑1 (MQ=255) tACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGt > 6:35992/1‑51 (MQ=255) aCCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGc > 4:53397/1‑149 (MQ=255) gTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGa < 6:55369/149‑1 (MQ=255) ctgcGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGaaa < 1:163277/147‑1 (MQ=255) ctgcGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAg < 1:367348/148‑1 (MQ=255) tgcGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGcc > 2:359743/1‑149 (MQ=255) cgcTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATgcgggccagcgcagcagtgacggtagtcttgccctggccagaggccggcgccgcgatcaacacggcggggcagtggcgcgatcgactcacagttcgac < 8:280575‑M2/149‑99 (MQ=255) gcTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCcgtc < 5:351289/149‑1 (MQ=255) gcTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCcgtc > 3:77348/1‑149 (MQ=255) cTGGCCCGCCTGCACCGCAACCTCGCGCGCAAGGTGCGGGTGTTCAAATgcgggccagcgcagcagtgacggtagtcttgccctggccagaggccggcgccgcgatcaacacggcggggcagtggcgcgatcgactcacagttcgacgc < 4:236052‑M2/149‑101 (MQ=255) tGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATgcgggccagcgcagcagtgacggtagtcttgccctggccagaggccggcgccgcgatcaacacggcggggcagtggcgcgatcgactcacagttcgacgcc < 3:244520‑M2/149‑102 (MQ=255) tGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCtgtg < 6:106899/121‑1 (MQ=255) tGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCtgtg > 5:106899/1‑121 (MQ=255) ggCCCGCatttgaacacccgcaccttgcgcccgaggttgcggtgcaggcgggccagcgcagcagtgacggtagtcttgccctggccagaggccggcgccgcgatcaacacggcggggcagtggcgcgatcgactcacagttcgacgcct > 3:114591‑M1/1‑7 (MQ=255) ccGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTctgc > 1:238131/1‑149 (MQ=255) | ATGGGCATGCTCAAGCACGCCTTCCAGGCTGGTATCCGCGCACAGAAAGGCGTCGAACTGTGAGTCGATCGCGCCACTGCCCCGCCGTGTTGATCGCGGCGCCGGCCTCTGGCCAGGGCAAGACTACCGTCACTGCTGCGCTGGCCCGCCTGCACCGCAACCTCGGGCGCAAGGTGCGGGTGTTCAAATGCGGGCCCGACTTTCTTGACCCGATGATTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTCTGC > NC_002947/1867828‑1868121 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |