New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4525157	54 (0.900)	4 (0.070)	3/246	NT	6.7%	coding (88/1125 nt)	mnmA	tRNA 2‑thiouridine(34) synthase MnmA
	?	NC_002947	= 4525183	61 (1.090)					coding (114/1125 nt)	mnmA	tRNA 2‑thiouridine(34) synthase MnmA

ACGCGGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCGGCATCAAGCTGCACACCGCC  >  NC_002947/4525010‑4525303                                                                                                                                                     |                                                                                                                                                   aCGCGGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCAAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCt                                                                                                                                                   <  6:266905/149‑1 (MQ=255)  cgcgGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTg                                                                                                                                                  <  7:218435/149‑1 (MQ=255)   gcggcgCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTTGACTCTTCAGTCTCAGCCCTTCTGc                                                                                                                                                 >  4:178194/1‑149 (MQ=255)           gcgGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAg                                                                                                                                         >  5:149929/1‑149 (MQ=255)           gcgGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCATCCGTCTCAGACCATCAGCTCATCGAg                                                                                                                                         >  6:318182/1‑149 (MQ=255)                       gAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAg                                                                                                                             <  3:178194/149‑1 (MQ=255)                             gCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGgaa                                                                                                                       >  4:28407‑M2/1‑146 (MQ=255)                                tttttCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGgaaggg                                                                                                                    >  6:149929‑M2/1‑143 (MQ=255)                                   ttCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCAGCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGgaagggct                                                                                                                  <  1:94060‑M2/149‑9 (MQ=255)                                    tCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCcacctggtagccctgctcgatgagcagaagggctg                                                                                                                 <  8:121752‑M1/148‑36 (MQ=255)                                      ccccTTGATACACACCGGTACCCATGTCCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCcacctggtagccctgctcgatgagcagaagggctgaga                                                                                                              <  8:26843‑M1/149‑39 (MQ=255)                                      ccccTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCcacctggtagccctgctcgatgagcagaagggctgaga                                                                                                              <  1:258232‑M1/149‑39 (MQ=255)                                       cgcTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCa                                                                                                             >  8:61238/3‑149 (MQ=255)                                       cccTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCcacctggtagccctgctcgatgagcagaagggctgagac                                                                                                             <  3:117484‑M1/149‑40 (MQ=255)                                            gATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCTGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGTCTACCAGGTGGAAGGGCTGTTCATga                                                                                                          <  5:318182/147‑1 (MQ=255)                                            gATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATga                                                                                                          <  2:83338/147‑1 (MQ=255)                                            gATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATg                                                                                                           >  8:114635/1‑146 (MQ=255)                                            gATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATg                                                                                                           >  5:39346/1‑146 (MQ=255)                                              tACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATgaagaa                                                                                                      >  1:179152/1‑149 (MQ=255)                                              tACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATgaagaa                                                                                                      <  6:171643/149‑1 (MQ=255)                                              tACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATgaaga                                                                                                       >  3:15737/1‑148 (MQ=255)                                               acacacCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAAc                                                                                                     >  2:200357/1‑149 (MQ=255)                                               acacacCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAAc                                                                                                     <  5:136444/149‑1 (MQ=255)                                                        tACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAagag                                                                                            <  1:55009/149‑1 (MQ=255)                                                         aCCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAagag                                                                                            >  4:370450/1‑148 (MQ=255)                                                             aTGACCAGCCCAGCACTTAAAGACCC‑CGCCAACCCCCGCGTCATCGTCGGCATGTGCGGCGGCGTGCACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGCCTACCAGGGGGAAGGGCTGTTCAAGAAGAACTGGGAAGAGgacga                                                                                       >  3:240409/1‑149 (MQ=255)                                                              tGACCAGCCGAGCACTTAAAGACCC‑CGGCAAGACCCGCGTCATCGTCGGGATGTGCGGAGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGATGATGGCTACCATGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGgacgac                                                                                      <  4:240409/149‑1 (MQ=255)                                                              tGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGgacgac                                                                                      <  7:61238/149‑1 (MQ=255)                                                              tGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGgacgac                                                                                      <  4:270419/149‑1 (MQ=255)                                                                aCCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGacgacg                                                                                     <  1:200357/148‑1 (MQ=255)                                                                  aagcacagcacTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCAt                                                                                                            <  8:305589/122‑1 (MQ=255)                                                                      ccagcACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGa                                                                              <  3:370450/149‑1 (MQ=255)                                                                       cagcACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTATTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGa                                                                              >  2:192522/1‑148 (MQ=255)                                                                         gcACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATa                                                                           <  4:15737/149‑1 (MQ=255)                                                                         gcACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATa                                                                           <  2:179152/149‑1 (MQ=255)                                                                                        cGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGt                                                              >  1:60217/1‑148 (MQ=255)                                                                                         gCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCAACGCCCGTg                                                             >  5:303591/1‑148 (MQ=255)                                                                                              gACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGAcc                                                       >  5:360255/1‑149 (MQ=255)                                                                                                 ccGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTgg                                                    >  4:137647/1‑149 (MQ=255)                                                                                                 ccGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTgg                                                    <  7:114635/149‑1 (MQ=255)                                                                                                 ccGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTgg                                                    <  5:140613/149‑1 (MQ=255)                                                                                                 ccGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCCCAGCCCTTCTGCTCATCGAGTAGGGCTACCAGGTGGAAGGGCTGTTCATgaa                                                                                                         <  7:172761/96‑1 (MQ=255)                                                                                                 ccGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCCCAGCCCTTCTGCTCATCGAGTAGGGCTACCAGGTGGAAGGGCTGTTCATgaa                                                                                                         >  8:172761/1‑96 (MQ=255)                                                                                                  cgatctaTCGTCGGCATGTCCGGCGTCGTGGAATCTTCCGTCTCATCCCTTCTTCTCATCGAGCATGGCTACCAGGTTGAAGGGCTGTTCATGAATAACTGGGAAGAGGAAGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGc                                                   <  3:198809/143‑1 (MQ=255)                                                                                                        aTCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACg                                              <  3:77374/148‑1 (MQ=255)                                                                                                         tcgtcgGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGATACCAGGTGGAAGGGCTGTTCATGAATAACTGGGAATAGGACGACGGCACCGAATACTGCAACGACCGTGAAGACCTgcc                                                   >  4:198809/1‑140 (MQ=255)                                                                                                            tcgGCATGTCCGGCGGCGTTGACTCTTCCTTCTCAGGCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAg                                         <  6:362950/149‑1 (MQ=255)                                                                                                              ggCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAgg                                        <  6:39346/148‑1 (MQ=255)                                                                                                                 aTGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCgt                                    <  6:360255/149‑1 (MQ=255)                                                                                                                   gTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCAGCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGAAGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCgtct                                  >  3:324575/1‑147 (MQ=255)                                                                                                                         cggcgTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGAcc                            <  2:60217/149‑1 (MQ=255)                                                                                                                             gTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTAt                        <  3:137647/149‑1 (MQ=255)                                                                                                                               ggACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCg                      >  2:112039/1‑149 (MQ=255)                                                                                                                                 aCTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCgg                     >  7:190995/1‑148 (MQ=255)                                                                                                                                 aCTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCgg                     >  1:290741/1‑148 (MQ=255)                                                                                                                                     ttCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCGGCATc                 >  3:228100/1‑148 (MQ=255)                                                                                                                                     ttCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCGGCATc                 >  4:82174/1‑148 (MQ=255)                                                                                                                                     ttCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCGGCATc                 >  2:230094/1‑148 (MQ=255)                                                                                                                                        cGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCGGCATCAAGc             <  2:94060/149‑1 (MQ=255)                                                                                                                                         gTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGgaagggctgagacggaagagtccacgccgccggacatgccgacgatgacgcgggtcttggcggggtctttaagtgctgggctggtcatgggtaccggtgtgtatcaaggg            <  3:117484‑M2/149‑111 (MQ=255)                                                                                                                                          tctcAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGgaagggctgagacggaagagtccacgccgccggacatgccgacgatgacgcgggtcttggcggggtctttaagtgctgggctggtcatgggtaccggtgtgtatcaagggg           <  1:258232‑M2/149‑112 (MQ=255)                                                                                                                                          tctcAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGgaagggctgagacggaagagtccacgccgccggacatgccgacgatgacgcgggtcttggcggggtctttaagtgctgggctggacatgggtaccggtgtgtatcaagggg           <  8:26843‑M2/149‑112 (MQ=255)                                                                                                                                            tcAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATc                       <  8:62542/135‑1 (MQ=255)                                                                                                                                            tcAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATc                       <  8:67656/135‑1 (MQ=255)                                                                                                                                            tcAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATc                       >  7:67656/1‑135 (MQ=255)                                                                                                                                            tcAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATc                       >  7:62542/1‑135 (MQ=255)                                                                                                                                            tcAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATc                       >  2:360898/1‑135 (MQ=255)                                                                                                                                             cAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGgaagggctgagacggaagagtccacgccgccggacatgccgacgatgacgcgggtcttggcggggtctttaagtgctgggctggtcatgggtaccggtgtgtatcaaggggga         <  8:121752‑M2/148‑114 (MQ=255)                                                                                                                                              aGCCCTTCcacctggtagccctgctcgatgagcagaagggctgagacggaagagtccacgccgccggacatgccgacgatgacgcgggtcttggcgctggtctttaagtgctgggctggtcatgggtaccggtgtgtatcaagggggaa       <  1:94060‑M1/149‑142 (MQ=255)                                                                                                                                                cccTTCcacctggtagccctgctcgatgagcagaagggctgagacggaagagtccacgccgccggacatgccgacgatgacgcgggtcttggcggggtctttaagtgctgggctggtcatgggtaccggtgtgtatcaagggggaaaaa     >  6:149929‑M1/1‑6 (MQ=255)                                                                                                                                                   ttCcacctggtagccctgctcgatgagcagaagggctgagacggaagagtccacgccgccggacatgccgacgatgacgcgggtcttggcggggtctttaagtgctgggctggtcatgggtaccggtgtgtatcaagggggaaaaacgc  >  4:28407‑M1/1‑3 (MQ=255)                                                                                                                                                     |                                                                                                                                                   ACGCGGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCC‑CGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCTGCTCATCGAGCAGGGCTACCAGGTGGAAGGGCTGTTCATGAAGAACTGGGAAGAGGACGACGGCACCGAATACTGCACCGCCCGTGAAGACCTGGCCGACGCCCAGGCCGTGTGCGACCGTATCGGCATCAAGCTGCACACCGCC  >  NC_002947/4525010‑4525303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.