New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5147701 = | NA (NA) | 4 (0.070) | 4/250 | NT | 19.9% | coding (806/1302 nt) | mscMB | miniconductance mechanosensitive channel protein |
? | NC_002947 | 5147725 = | 17 (0.280) | coding (830/1302 nt) | mscMB | miniconductance mechanosensitive channel protein |
GCGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGA > NC_002947/5147554‑5147760 | gCGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAg < 3:326866/148‑1 (MQ=255) gCGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGc < 1:355230/149‑1 (MQ=255) cGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGcc > 4:345685/1‑149 (MQ=255) aCGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTg < 4:327467/149‑1 (MQ=255) gtggACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCAt > 1:262237/1‑149 (MQ=255) tggACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATc < 2:32115/149‑1 (MQ=255) cATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCAATCCCCACCTGGCGCCTGATGAGCGACTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGAcg > 8:299504/1‑149 (MQ=255) tCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGAcgcc > 4:151003/1‑149 (MQ=255) cACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGACCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGAcgccg > 3:101972/1‑149 (MQ=255) cTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGccgccg < 6:154645/149‑1 (MQ=255) cTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGccgccg > 5:337371/1‑149 (MQ=255) gCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGATCATCGACGCCGCCGGc < 5:181336/148‑1 (MQ=255) acacGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCTACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTg > 1:82863/1‑149 (MQ=255) gTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCtt > 8:281659/1‑149 (MQ=255) ggAAAGTACAGAACTTCGACAAGTCCATCGTGTCCATCCCCAACTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTc < 4:43275/148‑1 (MQ=255) aaaGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCt > 4:74813/1‑149 (MQ=39) gTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCAc > 3:13183/1‑149 (MQ=37) tACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCAcc < 8:104424/149‑1 (MQ=35) tACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCAcc < 8:288933/149‑1 (MQ=35) tACACAACTTCGACCAGACGATCGTGTCCATCCCCACCTGGCGCGTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCAcc < 1:49356/149‑1 (MQ=255) cAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCcg > 8:348647/1‑149 (MQ=34) aGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTc < 5:154293/140‑1 (MQ=34) aGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTc > 6:154293/1‑140 (MQ=34) aCTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTTATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCgaa < 6:369560/149‑1 (MQ=21) aCTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCgaa < 3:74813/149‑1 (MQ=34) cTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCcgcg > 1:138949/1‑146 (MQ=34) cAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAAc < 1:303518/149‑1 (MQ=34) aaGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACa < 3:151003/149‑1 (MQ=34) cATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGcc > 5:380676/1‑149 (MQ=33) gtgtCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGa < 4:64689/148‑1 (MQ=32) | GCGACGTGGTGGACATCACCTTGCACACGGTGAAAGTACAGAACTTCGACAAGACCATCGTGTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTGA > NC_002947/5147554‑5147760 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |