New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 539780655 (0.910)3 (0.050) 3/246 NT 5.3% coding (818/1731 nt) hsdS type I restriction modification system specificity protein
?NC_002947 = 5397858 55 (0.980)coding (870/1731 nt) hsdS type I restriction modification system specificity protein

TTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCTTGCAACTTGCC  >  NC_002947/5397662‑5397951
                                                                                                                                                 |                                                                                                                                                 
ttGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAg                                                                                                                                               >  4:315674/1‑149 (MQ=255)
   gCCTGATTCGTAGTGCCGCGGCCCCTCTGCCTCCCCTCGCCGAACACCACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCGTAGGCGCCCGCGTGGAAGCCCCGCAGGCCGCCGCCGAGTCCGCCCACGTCCAACTGGTGCCGGc                                                                                                                                             >  2:316506/1‑148 (MQ=255)
        aTTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCt                                                                                                                                       >  3:309339/1‑149 (MQ=255)
            gTAGTTCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGAATCGTTGCCAATGTCTAAGAAGTAATGGCCCTATGCGACCGGTTGGAAGCCGAGCTGTCCGACGCCGAGTCCGCCCTCGTCCAACTGGTGCAGGCGATGCTCGAc                                                                                                                                   <  6:26518/149‑1 (MQ=255)
            gTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGa                                                                                                                                    >  6:338696/1‑148 (MQ=255)
            gTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGa                                                                                                                                    <  1:5732/148‑1 (MQ=255)
             tAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACa                                                                                                                                  <  3:2572/149‑1 (MQ=255)
             tAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCCACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACa                                                                                                                                  <  1:267222/149‑1 (MQ=255)
                  ccGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCt                                                                                                                              >  3:368560/1‑148 (MQ=255)
                        cACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCGACGTCGATCTGGTGCAGGCGATGCTCGACAGccaggcctt                                                                                                                        >  4:214653/1‑141 (MQ=255)
                        cACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCaa                                                                                                                       <  1:260496/149‑1 (MQ=255)
                                  tCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGAcg                                                                                                             >  1:344381/1‑149 (MQ=255)
                                     ccTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGAcgccg                                                                                                          >  5:119944/1‑149 (MQ=255)
                                      cTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGACCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGAcgccgc                                                                                                         >  6:158069/1‑149 (MQ=255)
                                           cGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTTATGCGACCGCTTGGAAGCCCAGCAGGCCGCCCCCGATACCCCCCACGACCACCTGGTCCAGCCGATGCTCGACACCCTGACCCAAGCCATCGACGccgccgcc                                                                                                     >  1:269162/1‑147 (MQ=255)
                                            gAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatcgc                                                                                                   >  4:36465‑M1/1‑101 (MQ=255)
                                              acaacaCCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGa                                                                                                                            <  1:318471/122‑1 (MQ=255)
                                              acaacaCCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGa                                                                                                                            >  2:318471/1‑122 (MQ=255)
                                              acaacaCCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTcg                                                                                                 <  5:136546/149‑1 (MQ=255)
                                                aacaCCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTcgc                                                                                                >  6:139091/1‑148 (MQ=255)
                                                       cATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGaccagtt                                                                                        >  4:329177‑M2/1‑142 (MQ=255)
                                                       cATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGaccagtt                                                                                        <  2:97270‑M2/149‑8 (MQ=255)
                                                       cATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGaccagtt                                                                                        <  2:228997‑M2/149‑8 (MQ=255)
                                                       cATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGaccagtt                                                                                        >  3:315674‑M2/1‑142 (MQ=255)
                                                       cATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGaccagtt                                                                                        >  7:3640‑M2/1‑142 (MQ=255)
                                                         tCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatcgcctgcaccagttgg                                                                                      <  3:36465‑M1/149‑62 (MQ=255)
                                                              gCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTTGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatctcctgcaccagttggacgt                                                                                  <  2:12492‑M1/148‑66 (MQ=255)
                                                               ccAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAgcgc                                                                                >  3:204793/1‑149 (MQ=255)
                                                                cAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGcc                                                                               >  8:65302/1‑149 (MQ=255)
                                                                  aaGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTa                                                                             <  5:338696/149‑1 (MQ=255)
                                                                   aGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAg                                                                            <  8:10011/149‑1 (MQ=255)
                                                                     tCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCTCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCGTCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGcc                                                                          >  7:316910/1‑149 (MQ=255)
                                                                       gaagaaCTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGa                                                                        >  2:128549/1‑149 (MQ=255)
                                                                       gaagaaCTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGa                                                                        <  4:309339/149‑1 (MQ=255)
                                                                                aTGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTca                                                               >  3:366085/1‑149 (MQ=255)
                                                                                aTGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTc                                                                <  6:119944/148‑1 (MQ=255)
                                                                                   gCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTcaca                                                             <  6:109520/148‑1 (MQ=255)
                                                                                   gCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCacac                                                            >  4:271515/1‑149 (MQ=255)
                                                                                     ccTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAg                                                                            <  7:92123/131‑1 (MQ=255)
                                                                                     ccTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAAATGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCCACCAGTTGGCAGCGCCTAg                                                                            >  8:92123/1‑131 (MQ=255)
                                                                                         aTGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCCGCGCCTAGCCGAGCACTTTCACACCCTGt                                                       >  3:262295/1‑149 (MQ=255)
                                                                                          tGCGACCGGTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACATCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGt                                                       <  2:269162/148‑1 (MQ=255)
                                                                                          tGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGtt                                                      >  1:17445/1‑149 (MQ=255)
                                                                                            cGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTca                                                    <  3:13976/149‑1 (MQ=255)
                                                                                             gACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTcac                                                   <  3:271515/149‑1 (MQ=255)
                                                                                             gACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTca                                                    >  2:180571/1‑148 (MQ=255)
                                                                                               ccGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACCCCCTGTTcaca                                                  >  7:143340/1‑148 (MQ=255)
                                                                                                 gCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAAc                                               >  1:155822/1‑149 (MQ=255)
                                                                                                     ggAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGa                                             <  1:97270/147‑1 (MQ=255)
                                                                                                         gCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGc                                       >  6:350119/1‑149 (MQ=255)
                                                                                                            cagcagGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGa                                                                                                                            >  4:55467/1‑61 (MQ=255)
                                                                                                            cagcagGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGa                                                                                                                            <  3:55467/61‑1 (MQ=255)
                                                                                                                   ccGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGcc                             <  7:65302/149‑1 (MQ=255)
                                                                                                                      aCGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTc                          <  4:366085/149‑1 (MQ=255)
                                                                                                                             gTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGaaaa                   <  1:128549/149‑1 (MQ=255)
                                                                                                                              tCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACCCCCTGTTCACAAACGAGTTTGCCATCGCCGCCCTCAAGAAAAc                  >  6:200447/1‑149 (MQ=255)
                                                                                                                               ccGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAAcc                 >  6:54804/1‑149 (MQ=255)
                                                                                                                               ccGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAAcc                 >  6:60333/1‑149 (MQ=255)
                                                                                                                                   ccACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCctct             >  1:59132/1‑149 (MQ=255)
                                                                                                                                    cACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCtt            <  1:228997/149‑1 (MQ=255)
                                                                                                                                     aCGTCCAACTGGTGCAGGAGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGaccagttggacgtgggcggactcggcgtcggcctgctgggcttcaaagcggtcgcatagggccattagttcttcgactttggc            <  2:12492‑M2/148‑84 (MQ=255)
                                                                                                                                       gTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCTTGc          >  7:199265/1‑148 (MQ=255)
                                                                                                                                       gTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCTTGc          >  1:341830/1‑148 (MQ=255)
                                                                                                                                        tCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCTTGCaa        <  2:344381/149‑1 (MQ=255)
                                                                                                                                         ccAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGaccagttggacgtgggcggactcggcgtcggcctgctgggcttccaagcggtcgcatagggccattagttcttcgactttggcaacga       <  3:36465‑M2/149‑89 (MQ=255)
                                                                                                                                          cAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACACTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCTTGCAACt      >  7:330997/1‑149 (MQ=255)
                                                                                                                                           aaCTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatcgcctgcaccagttggacgtgggcggactcggcgtcggcctgctgggcttccaagcggtcgcatagggccattagttcttcgactttggcaacgatg     <  2:228997‑M1/149‑143 (MQ=255)
                                                                                                                                           aaCTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatcgcctgcaccagttggacgtgggcggactcggcgtcggcctgctgggcttccaagcggtcgcatagggccattagttcttcgactttggcaacgatg     >  7:3640‑M1/1‑7 (MQ=255)
                                                                                                                                           aaCTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatcgcctgcaccagttggacgtgggcggactcggcgtcggcctgctgggcttccaagcggtcgcatagggccattagttcttcgactttggcaacgatg     <  2:97270‑M1/149‑143 (MQ=255)
                                                                                                                                           aaCTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatcgcctgcaccagttggacgtgggcggactcggcgtcggcctgctgggcttccaagcggtcgcatagggccattagttcttcgactttggcaacgatg     >  3:315674‑M1/1‑7 (MQ=255)
                                                                                                                                           aaCTGGTcgcgaagtcggcggcgtcgatggcttgggtcaggctgtcgagcatcgcctgcaccagttggacgtgggcggactcggcgtcggcctgctgggcttccaagcggtcgcatagggccattagttcttcgactttggcaacgatg     >  4:329177‑M1/1‑7 (MQ=255)
                                                                                                                                              tGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAACCCCTCTTGCAACTTGcc  >  8:211330/1‑149 (MQ=255)
                                                                                                                                              tGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCTTGCAACTTGcc  >  5:232604/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
TTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTGGTGCAGGCGATGCTCGACAGCCTGACCCAAGCCATCGACGCCGCCGACTTCGCGACCAGTTGGCAGCGCCTAGCCGAGCACTTTCACACCCTGTTCACAAACGAGTTTGCCATCGACGCCCTCAAGAAAACCCTCTTGCAACTTGCC  >  NC_002947/5397662‑5397951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.