New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5786472 =	62 (1.030)	3 (0.060)	3/216	NT	5.7%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5786557 =	48 (0.970)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin

GGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCA  >  NC_002947/5786325‑5786619                                                                                                                                                      |                                                                                                                                                    gggggACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCtg                                                                                                                                                    >  7:130902/1‑149 (MQ=255)   ctcaacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctt                                                                                                                                                     >  4:34987‑M1/148‑148 (MQ=255)    gtaCTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCAAGGCCTTTCGAGTAACAGCCCTGTATGCAAGCCTACGCCGAGCGACCGCCGGAT‑TGTGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTgg                                                                                                                                                 <  7:86395/147‑1 (MQ=255)    ggACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGATGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCtgtg                                                                                                                                                  <  1:287862/149‑1 (MQ=255)      aacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTgg                                                                                                                                                 >  2:332551‑M1/145‑149 (MQ=255)        tACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGc                                                                                                                                             >  6:279789/1‑149 (MQ=255)          cAGTGAAGTTCGACGGCTGCACCAAGTCCTGGGCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAATCACCTGGAAATCAGCCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGc                                                                                                                                             <  1:246845/148‑1 (MQ=255)          cAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTCCCTGATTAGCGCCGAATCCTGTGGGAGCgg                                                                                                                                           >  3:351345/1‑149 (MQ=255)            gTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGc                                                                                                                                         <  4:334524/149‑1 (MQ=255)                 ctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTg                                                                                                                                      <  6:48348‑M1/16‑1 (MQ=255)                  tttttgcagcgagcgcatttcggcgcatcgcgcaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGc                                                                                                                                     >  4:215070‑M1/133‑149 (MQ=255)                  tttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGc                                                                                                                                     <  1:163087‑M1/17‑1 (MQ=255)                  tttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGc                                                                                                                                     <  7:123447‑M1/17‑1 (MQ=255)                     ttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCcg                                                                                                                                  <  3:253041‑M1/20‑1 (MQ=255)                        ggCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAg                                                                                                                             >  6:224077/1‑149 (MQ=255)                        ggCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGCAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAg                                                                                                                             <  1:119635/149‑1 (MQ=255)                         agcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                              <  7:184627‑M1/24‑1 (MQ=255)                           tGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAg                                                                                                                          >  1:224884/1‑149 (MQ=255)                            gCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCACGCGAAGCAgg                                                                                                                         >  1:85868/1‑149 (MQ=255)                             cACCAAGTCCGGGCCAGGCCTTTCGAGGAACACCCCGGGATGCAAGCCTACGCCGAGCGTCCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAg                                                                                                                          <  5:297733/147‑1 (MQ=255)                               ccAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGaacaccggc                                                                                                                       >  3:107958/1‑141 (MQ=255)                                cAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                     >  3:122156/1‑149 (MQ=255)                                cAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                     >  5:125406/1‑149 (MQ=255)                                  aGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGt                                                                                                                   <  7:319341/149‑1 (MQ=255)                                   gTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTg                                                                                                                  <  8:130902/149‑1 (MQ=255)                                      cTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGAt                                                                                                                <  5:279789/148‑1 (MQ=255)                                         gCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGAt                                                                                                            >  8:332036/1‑149 (MQ=255)                                           cAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGAATg                                                                                                          >  3:50971/1‑149 (MQ=255)                                             ggCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCa                                                                                                        <  7:332036/149‑1 (MQ=255)                                             ggCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCa                                                                                                        <  8:52641/149‑1 (MQ=255)                                                 tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCgg                                                                                                    >  1:171077/1‑149 (MQ=255)                                                 tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGACGTGCCCGCGAAGCAGGCag                                                                                                                      <  3:218583/131‑2 (MQ=255)                                                 tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGACGTGCCCGCGAAGCAGGCag                                                                                                                      >  4:218583/1‑130 (MQ=255)                                                 tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCAGGAAATCAG‑CTCCTCTTCCTGATTAGCGCCGAATCCTCTGGGAGCGGGCGTCCCCGCGAAGCACGCAACATCAAGGATTTCAACg                                                                                                     >  4:332265/1‑148 (MQ=255)                                                     gAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                     <  3:206486/128‑1 (MQ=255)                                                     gAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                     >  4:206486/1‑128 (MQ=255)                                                         aaCAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCg                                                                                            <  8:319571/149‑1 (MQ=255)                                                           cAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCTGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAATGTGATGGATTGCACCGGCTTCGCCGgt                                                                                          <  5:288550/149‑1 (MQ=255)                                                              cccGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGa                                                                                                                 >  7:300604/1‑123 (MQ=255)                                                                      ggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCggg                                                                                 >  7:74562‑M1/81‑149 (MQ=255)                                                                        ttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTcgc                                                                                    <  7:100438‑M1/66‑1 (MQ=255)                                                                        ttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTcgc                                                                                    >  8:100438‑M1/79‑144 (MQ=255)                                                                           ccTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGccc                                                                          <  6:310757/149‑1 (MQ=255)                                                                               cGCCGAGCGACCGCCGGAG‑TGTGGCAAGCACCTGGAAATCAT‑CTGCTCTTCCTGATTAGCGCGGAATCCTGTGGTAGCTGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCt                                                                       <  8:266361/148‑1 (MQ=38)                                                                               cGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGc                                                                        <  1:219885/147‑1 (MQ=255)                                                                                gCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTcc                                                                     <  7:315529/149‑1 (MQ=255)                                                                                 ccGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                    <  2:171077/149‑1 (MQ=255)                                                                                          cgccgGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGaaa                                                           >  8:249420/1‑149 (MQ=255)                                                                                            ccgGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGtt                                                                                       <  4:143376/119‑1 (MQ=255)                                                                                            ccgGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGtt                                                                                       >  3:143376/1‑119 (MQ=255)                                                                                            ccgGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAAGTGATGGATTGCACCGCCGTCGCCGGTGTTAGCCGGGACCCCCGCTCCCACAAAGGAAcc                                                         >  5:248805/1‑149 (MQ=37)                                                                                              ggAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGt                                                       >  3:298072/1‑149 (MQ=255)                                                                                               gAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTg                                                      <  4:122156/149‑1 (MQ=255)                                                                                                     gggCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAcc                                                  >  8:245728/1‑148 (MQ=255)                                                                                                             aCCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTcg                                                                                     <  1:342567/105‑1 (MQ=255)                                                                                                             aCCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTcg                                                                                     >  2:342567/1‑105 (MQ=255)                                                                                                               cTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCg                                          >  6:91282/1‑146 (MQ=255)                                                                                                                tGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGa                                                     >  6:378515/1‑134 (MQ=255)                                                                                                                tGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGa                                                     <  5:378515/134‑1 (MQ=255)                                                                                                                  gAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGAt                                     <  2:224884/148‑1 (MQ=255)                                                                                                                    aaTCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAc                                                   <  4:117640/132‑1 (MQ=255)                                                                                                                      tCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAAt                                <  6:125406/149‑1 (MQ=255)                                                                                                                             gctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAAcc                                                         >  6:146690/1‑118 (MQ=255)                                                                                                                             gctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAAcc                                                         <  5:146690/118‑1 (MQ=255)                                                                                                                              ctctTCCTGATTAGCGCCGAATCCTGTGTGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccg                           <  5:224077/147‑1 (MQ=255)                                                                                                                               tctTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTAGCCGGTGTTAGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccgacc                        >  8:123447/1‑149 (MQ=255)                                                                                                                                   ccTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                     >  3:237127/1‑148 (MQ=255)                                                                                                                                   ccTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                     <  4:237127/148‑1 (MQ=255)                                                                                                                                    cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTg                   <  5:91282/149‑1 (MQ=255)                                                                                                                                     tGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCCCAAGGAAACCGTGAACCCCACACCGGAGATGAAATGACCGCACCACTgg                  >  8:314576/1‑149 (MQ=255)                                                                                                                                       aTTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGGCCGCCCGCTCCCACAAGGAAACCGTGCACCCACCACCGGAGATGAAATGACCGACCCACGGGt                 >  5:48348/1‑148 (MQ=37)                                                                                                                                          aGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAAt              <  7:249420/148‑1 (MQ=255)                                                                                                                                          aGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAAt              <  4:351345/148‑1 (MQ=255)                                                                                                                                           gcgcCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATcc            >  4:253041/1‑149 (MQ=255)                                                                                                                                            cgcCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAGCGGGAGGGAGTGCACCGGCTTCGCCGGTGTTCGCGGGCCCGCCCGCTCCCCCAAGGAACCCGTGACCACAACCCCGGCGATGAAAGGACCGACCCACAGCTCATccc           >  6:277475/1‑149 (MQ=21)                                                                                                                                              ccGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTAGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCCGAGATGAAATGACCGACCCCCTGGTAATcca           >  4:302229/1‑146 (MQ=255)                                                                                                                                                     cTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCAGCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCAAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCa  <  4:298072/149‑1 (MQ=255)                                                                                                                                                     cTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTCGTAATCCCCTGccccc   >  6:186970/1‑148 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAG‑TGGGGCAAGCACCTGGAAATCAG‑CTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCA  >  NC_002947/5786325‑5786619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.